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SCNpilot_BF_INOC_scaffold_60_60

Organism: SCNpilot_BF_INOC_Clostridium_37_18

near complete RP 48 / 55 MC: 5 BSCG 50 / 51 MC: 4 ASCG 14 / 38 MC: 4
Location: 60300..61010

Top 3 Functional Annotations

Value Algorithm Source
Pseudouridine synthase {ECO:0000256|RuleBase:RU003887}; EC=5.4.99.- {ECO:0000256|RuleBase:RU003887};; TaxID=212717 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium similarity UNIPROT
DB: UniProtKB
  • Identity: 60.9
  • Coverage: 235.0
  • Bit_score: 290
  • Evalue 1.60e-75
Pseudouridine synthase n=1 Tax=Clostridium tetani (strain Massachusetts / E88) RepID=Q899L7_CLOTE similarity UNIREF
DB: UNIREF100
  • Identity: 60.9
  • Coverage: 235.0
  • Bit_score: 290
  • Evalue 1.10e-75
tRNA pseudouridine synthase A similarity KEGG
DB: KEGG
  • Identity: 60.9
  • Coverage: 235.0
  • Bit_score: 290
  • Evalue 3.10e-76

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Taxonomy

Clostridium tetani → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 711
ATGAGAATTAATAATTACATCAGTGCATCGGGCTATTGCTCAAGAAGAAAAGCGGATGAACTGATTTTACAAAAAAAAGTTAAAATCAATGGCAGAGTGGCGTCTATCGGTGATCAGGTCGGAGAAAAGGACCGTGTTGAGGTGGATGGAAAACGCATTGGCCAGAAAAAGAAACACGTCTATATCGCTTTTAATAAACCCGAGGGCGTTATCTGTACCACGGAAAGGCATATAAAGAATAACATCATTGATTTTATAGGGTACGAGGAGCGAATTTTTCCAATTGGAAGACTGGATAAGGACAGTGAGGGATTAATTCTCTTAACCAGCGATGGGAGTATCGTCAACGAGGTTTTAAGAGCTGAAAATGGTCACGAGAAGGAGTATCGTGTCACCCTAAATCACGCATTTGACGCTGATTTTTTAGAGCAAATGCAGTCAGGGGTCGTCATTTTTAACCCCGTAAAGAAAAAGCATGAAAAGACCCTACCTTGTAAGATTCAAAAATCCGATGCGACGACCTTTTCGATAATTCTTTCACAGGGGCTAAATCGACAGATCAGACGTATGAGTGAGGCTCTGGGATATGAGGTTGTTAAACTCAAGAGAGTGAGATTTCTGAATATTAAGCTGGGAAATCTAAAGCTTGGTCACTATCGGCCATTGTCAGATGAGGAAGTTAAGAACTTGTTAAACAAAAAGAACAAGTAA
PROTEIN sequence
Length: 237
MRINNYISASGYCSRRKADELILQKKVKINGRVASIGDQVGEKDRVEVDGKRIGQKKKHVYIAFNKPEGVICTTERHIKNNIIDFIGYEERIFPIGRLDKDSEGLILLTSDGSIVNEVLRAENGHEKEYRVTLNHAFDADFLEQMQSGVVIFNPVKKKHEKTLPCKIQKSDATTFSIILSQGLNRQIRRMSEALGYEVVKLKRVRFLNIKLGNLKLGHYRPLSDEEVKNLLNKKNK*