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SCNpilot_BF_INOC_scaffold_568_34

Organism: SCNpilot_BF_INOC_Xanthomonadales_67_72

near complete RP 52 / 55 BSCG 51 / 51 ASCG 13 / 38
Location: comp(40440..41279)

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, AraC family n=1 Tax=Variovorax paradoxus (strain EPS) RepID=E6V0S7_VARPE similarity UNIREF
DB: UNIREF100
  • Identity: 42.6
  • Coverage: 291.0
  • Bit_score: 213
  • Evalue 2.70e-52
Uncharacterized protein {ECO:0000313|EMBL:EYR66798.1}; TaxID=1444315 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter capsici similarity UNIPROT
DB: UniProtKB
  • Identity: 49.3
  • Coverage: 274.0
  • Bit_score: 224
  • Evalue 1.60e-55
AraC family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 42.6
  • Coverage: 291.0
  • Bit_score: 213
  • Evalue 7.50e-53

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Taxonomy

Lysobacter capsici → Lysobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 840
ATGCTCAGCACACCGACCACCGCCGCACTGCAGCCCTTCGTCGAGCTGTTCTGGGCGCGCGCGGCGCAGCCGGCTCGCAGCGGTCTGCGCGAACGCGTGCTGCCCAGCGGCCTGCCGCATCTGGCGTTGCGGCTCGACGGCGCCGGGCTGCGCCTGTATGCGGACGAGTACGACCGCGACGGAGAACTGATCGCCAATGCCGTCGTCGCCGGCGTACGCACGCGGCCGTATTTCAAAGAGGTCGGCGAACCCTCGCGCTCGGTCGGTGCCGTATTGCGCCCAGGCGCCGCGCGCGCGCTGTTCGGCTGCAGTGCCGCCATGCTGGCCGATCGCCACGTCGCGCTCGGCGAACTCTGGGGCGGCGAAGCCGACGTGCTGCTGCAGCGCCTCGCGCAGGCCGCCGATACGGAACGACAGATCGAGCTGCTGCAGGGGACGCTGCTGCGCCGGCTGCGGCCGATCCGCGCCGTACCGGCGCCGATCGCCGCCGCCCTCGCGGCCGTCACCGCCGACAGCGACATCGCTGCGCTCGTGCGCGCCGGCGGCTGCAGCCACAAGCATTTCGTCGCGCTGTTCCGCGACGCGGTCGGCCTGCCGCCCAAGCGCTATGCGCGTGTGCTGCGACTGCAGCGGGCACTGCAATCGCAATCCGACGACGGCTGGAGCGAACGCGCGCTCGATGCGGGCTACAGCGACCAGGCACATCTGCAGCGCGAATTCCGTGCACTGACCGGACTCACGCCGCAGCACTGGCGCCGTGCGCAGACCGGGTCGACACATCATCTGACCGAAGCGGCACCGGTCAATTTCGTTCAAGACCCGGCACGGCGGCGCCGCTAA
PROTEIN sequence
Length: 280
MLSTPTTAALQPFVELFWARAAQPARSGLRERVLPSGLPHLALRLDGAGLRLYADEYDRDGELIANAVVAGVRTRPYFKEVGEPSRSVGAVLRPGAARALFGCSAAMLADRHVALGELWGGEADVLLQRLAQAADTERQIELLQGTLLRRLRPIRAVPAPIAAALAAVTADSDIAALVRAGGCSHKHFVALFRDAVGLPPKRYARVLRLQRALQSQSDDGWSERALDAGYSDQAHLQREFRALTGLTPQHWRRAQTGSTHHLTEAAPVNFVQDPARRRR*