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SCNpilot_BF_INOC_scaffold_6_187

Organism: SCNpilot_BF_INOC_Xanthomonadales_67_72

near complete RP 52 / 55 BSCG 51 / 51 ASCG 13 / 38
Location: comp(208879..210396)

Top 3 Functional Annotations

Value Algorithm Source
RND efflux system, outer membrane lipoprotein, NodT n=1 Tax=Methylobacillus flagellatus (strain KT / ATCC 51484 / DSM 6875) RepID=Q1GYP9_METFK similarity UNIREF
DB: UNIREF100
  • Identity: 59.0
  • Coverage: 473.0
  • Bit_score: 545
  • Evalue 7.00e-152
RND transporter similarity KEGG
DB: KEGG
  • Identity: 61.9
  • Coverage: 494.0
  • Bit_score: 571
  • Evalue 2.00e-160
RND transporter {ECO:0000313|EMBL:AJP49546.1}; TaxID=1565605 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae.;" source="Rhodocyclaceae bacterium PG1-Ca6.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 61.9
  • Coverage: 494.0
  • Bit_score: 571
  • Evalue 9.80e-160

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Taxonomy

Rhodocyclaceae bacterium PG1-Ca6 → Rhodocyclales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1518
ATGGCAAGAACTGATCATCGCGCCCTGCGTAATGCCGCCGTCGCCGCCGTGCTCGCGACGGCGCTGGCCGGCTGCTCGCTGACGCCGCCGCTGCGGCTGCCCGAAATCGCCGCCGGCGAGCACTACAAGGAACAGGCGCCGTGGACGGCTGCGGCACCGGCCGACGGCTTGCCGCGTGCGGCCTGGTGGGGCCTGTACGGCGAGCGCGAGCTCGATGGCCTGCAACAGCGCCTGCTCGCCGGCAGCCCGGACCTGGCCGCTGCGCTCGCGCGCTATGAACAGGCGCGCGCCTACGGCGATCAACTGCGCTCGGGCCTGTTTCCGAGCCTGGGCCTGAGCGCCGACGCTGCGCGGGCGCGCCAGTCGGCGACACGTCCGCCGGGCGGCAACGCGCTGCCGCGCTTCTACGAGTCCTACGACGTGGGCCTGAGCGCCGGCTACGAGCTCGATCTCTGGGGCCGCGTCCGCAACAGCGTCGCCGCCGGCGAACACGCGAGTGCCGCCGCCGCGGCCGATCTCGAATCGGCGCGCCTGAGCCTGCAGGCTGAACTCGCCGACGACTACATCGTGCTGCGCGGACTCGACCAGCAGGCCGCCTTGCTCGACGGCACGGTCGCCGCCTACGACAAGGCCGTCGCATTGACGCAGAAGCGCCGCGACGCCGGCATCGCTTCGGGCCTGGACGTCGCACGCGCGCAGACCCAGCTCGACATGGCACGCTCGCAGTCGGCGCAGAACAAGGCCCAGCGCGCGCTGGCCGAACATGCGATCGCCGCGCTGGTCGGCGAGGCGCCGGCGGCGTTCGCACTGCCCGCGTCAGATGCGGCCATCCGCCTGCCGGTGATACCGCTGGACCTGCCCTCGACCCTGCTGCAGCGCCGGCCCGACATCGCCGCGGCGCAGCGCCGCGTCGCCGCGGCCAATGCGACGGTCGGCATCGCGCGCGCGGCCTGGTTCCCGTCCATCAGTCTCGGCGCGACGTTCGGCTATCAGAGCAATCAGCCCGGCGGCTGGCTCAGCGCGCCGAACGCGGCCTGGGCCATAGGCCCCAGCCTGCTGCTGGATCTGTTCGATGCCGGCAAGCGCCGCGCACAGACCGCGCAGGCGCAAGCCGCGCTCGACGAGGCCGGTGCGCGCTACCGCGGCGTCGTGCTCGGCGCGTTCCAGCAGGTCGAGGACAACCTGGCCCTGCTGCAGCACTACAAGGTCGCCGCCGACGCCGAGGAATCGGCCGTGGCCTCGGCGCGGCGCTCGCTGGATTTCGCGATGACGCGCTATCGCGAAGGCGCAGTCAGTTATCTCGAAGTCGTGCAGTCGCAGACCGTCGCGCTGGCCGCGCAGCGCGCGGCGCTGGATCTGGACACGCGCCAGCTGCGCGCGAGCGTGGCGCTGATCCGCGCTCTCGGCGGCGGCTGGCGCGACGACGCCGCGGCATCCGATCCCGTCGCCGCGGCCACCGGGAGCGCCGCGGCGTCAGCGACAGGCAGCGGCGCGTCGGCGCCGTCTCTCAACCCGTAA
PROTEIN sequence
Length: 506
MARTDHRALRNAAVAAVLATALAGCSLTPPLRLPEIAAGEHYKEQAPWTAAAPADGLPRAAWWGLYGERELDGLQQRLLAGSPDLAAALARYEQARAYGDQLRSGLFPSLGLSADAARARQSATRPPGGNALPRFYESYDVGLSAGYELDLWGRVRNSVAAGEHASAAAAADLESARLSLQAELADDYIVLRGLDQQAALLDGTVAAYDKAVALTQKRRDAGIASGLDVARAQTQLDMARSQSAQNKAQRALAEHAIAALVGEAPAAFALPASDAAIRLPVIPLDLPSTLLQRRPDIAAAQRRVAAANATVGIARAAWFPSISLGATFGYQSNQPGGWLSAPNAAWAIGPSLLLDLFDAGKRRAQTAQAQAALDEAGARYRGVVLGAFQQVEDNLALLQHYKVAADAEESAVASARRSLDFAMTRYREGAVSYLEVVQSQTVALAAQRAALDLDTRQLRASVALIRALGGGWRDDAAASDPVAAATGSAAASATGSGASAPSLNP*