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SCNpilot_BF_INOC_scaffold_139_12

Organism: SCNpilot_BF_INOC_Burkholderiales_65_44

near complete RP 52 / 55 BSCG 51 / 51 ASCG 14 / 38
Location: 12607..12966

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L20 n=1 Tax=Acidovorax avenae (strain ATCC 19860 / DSM 7227 / JCM 20985 / NCPPB 1011) RepID=F0QD51_ACIAP similarity UNIREF
DB: UNIREF100
  • Identity: 90.8
  • Coverage: 119.0
  • Bit_score: 210
  • Evalue 9.70e-52
50S ribosomal protein L20 similarity KEGG
DB: KEGG
  • Identity: 90.8
  • Coverage: 119.0
  • Bit_score: 210
  • Evalue 2.70e-52
50S ribosomal protein L20 {ECO:0000256|HAMAP-Rule:MF_00382, ECO:0000256|RuleBase:RU000560}; TaxID=643561 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovo similarity UNIPROT
DB: UniProtKB
  • Identity: 90.8
  • Coverage: 119.0
  • Bit_score: 210
  • Evalue 1.40e-51

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Taxonomy

Acidovorax avenae → Acidovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 360
ATGTCTCGCGTCAAACGTGGTGTTACGGCCCGCGCCCGTCACAAAAAAGTTCTCGCCCTTGCCAAGGGCTTTCGCGGTCGCCGCGGCAACGTCTTCCGCATCGCCAAACAGGCGGTGATGAAGGCGGGCCAGTACGCCTACCGTGATCGCCGCAACAAGAAGCGTGTCTTCCGTCGCCTGTGGATCACCCGCATCAACGCCGCCGTGCGTGCGCAGGGCCTGACCTACAGCCAGTTCACCAACGGCCTGAAGAAGGCCGCGATCGAGATCGACCGCAAGATGCTGGCCGACCTCGCGGTGCACGACGAAGCCGCCTTTGGCCGCATCGTGGAGCAGGTCAAGACCAAGCTGGCAGCCTGA
PROTEIN sequence
Length: 120
MSRVKRGVTARARHKKVLALAKGFRGRRGNVFRIAKQAVMKAGQYAYRDRRNKKRVFRRLWITRINAAVRAQGLTYSQFTNGLKKAAIEIDRKMLADLAVHDEAAFGRIVEQVKTKLAA*