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SCNpilot_BF_INOC_scaffold_335_51

Organism: SCNpilot_BF_INOC_Burkholderiales_65_44

near complete RP 52 / 55 BSCG 51 / 51 ASCG 14 / 38
Location: comp(47802..49235)

Top 3 Functional Annotations

Value Algorithm Source
23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD {ECO:0000256|HAMAP-Rule:MF_01010}; EC=2.1.1.190 {ECO:0000256|HAMAP-Rule:MF_01010};; 23S rRNA(m5U1939)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_0 similarity UNIPROT
DB: UniProtKB
  • Identity: 78.1
  • Coverage: 474.0
  • Bit_score: 761
  • Evalue 6.30e-217
23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD n=1 Tax=Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601) RepID=F4GC94_ALIDK similarity UNIREF
DB: UNIREF100
  • Identity: 78.1
  • Coverage: 474.0
  • Bit_score: 761
  • Evalue 4.50e-217
RNA methyltransferase, trma family similarity KEGG
DB: KEGG
  • Identity: 78.1
  • Coverage: 474.0
  • Bit_score: 761
  • Evalue 1.30e-217

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Taxonomy

Alicycliphilus denitrificans → Alicycliphilus → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1434
ATGAACGGTCCCCCTTCCGATCCACTGCCTCTGCCCGCCGACTGGCTTGAAGTGACCTCCATGGACATGGAGGCGCAAGGCGTGGCCCATCGCGCCGACGGCAAGGTGGTTTTCATCGATGGCGCGCTGCCCGGCGAACTGGTGAGCGCGCGCACGCGCCGCAGCAAGAACCAGTGGGAGCAGGCGGACCTGACCGAGATTCACCGCGAATCCAGCCTGCGTGTGGCGCCACGCTGCCCGCACTTCGGCCTGCATGCCGGTGCCTGCGGGGGGTGCAAGATGCAGCACCTCGACGCGGCCGCGCAGGTGGCGGCCAAGCAGCGGGTACTCGAAGACAACCTCTGGCATCTGGGCAAGGTCAGGCCCGAGTCGGTGCTCACGCCCATCCATGGGCCGGCCTGGGGCTACCGCTACCGGGCGCGCCTGGCGGTGCGCCACGTGGCGAAGAAGGGCACGGTGCTCGTGGGCTTTCACGAGCGCAAGAGCCGCTACATCGCGGACATGCACACCTGCAAGATCCTGCCGCCGCATGTGGATGCGCTCCTGATGCCGCTGCGCGAGCTGATCGGCGCCATGGCGGCGCGCGACACCTGCCCGCAGATCGAGCTGGCGTGCGGCGACGAGGTCACGGTGCTGGTGCTGCGCCATCTGGAGCCGTTGTCGTCCGGCGATCGGGACAGGCTGCGCGCGTTCGGCAGGCGGCATGGCGTGCAATGGTGGCTGCAGCCCAAGGGGCCGGACAGCGCGCAGCCGCTCGACGAGGGCGGCGCGCCGCTGTGCTACCGCCTGCCGGATTTCGGCATCACCATCGCCTTCAGGCCCACCGATTTCACGCAGGTGAATCCGCAGATCAACCGTGTGCTGGTCGGGCGGGCGCTCAGGCTCCTGGACCCCCGCAAGACGGACCGCGTGATCGACTGGTTCTGCGGCCTGGGCAATTTCACGCTGCCTCTGGCCACGCAAGCGGGGCACGTGCTGGGGGTGGAAGGCAGCGCCGCACTGATTGCCCGTGCGCGCGAGAATTTTGTATCAAATCAGGCTCAGTCGCTTGCTGGACAAGCGCTTGCAGCTACTGAATTTGAAGTGCGTAACCTGTTTGAAATCACGGCGCCGGAGCTGGTGGCGCACGGCCCGGCGCAGCGCTGGCTGATCGATCCGCCGCGCGAGGGGGCGTTTGCGCTCGTCAAGGCGCTGGCGGACATTCACCAGGCGCGCCTCGGAACGGAAGGCGCGCCGGAACTTTCCGCCGATGCGCGGGCATGGCAGGCGCCAGAGCGCATCGTCTACGTGAGCTGCAATCCGGCGACACTTTCGCGCGATGCGGGACTGCTGGTGCATCAGGCGGGCTATCGCTGCACGGCTGCGGGAGTGATCAACATGTTCCCGCACACCGCGCATGTGGAGAGCATGGCGGTGTTCGAGCGGATGGCTTGA
PROTEIN sequence
Length: 478
MNGPPSDPLPLPADWLEVTSMDMEAQGVAHRADGKVVFIDGALPGELVSARTRRSKNQWEQADLTEIHRESSLRVAPRCPHFGLHAGACGGCKMQHLDAAAQVAAKQRVLEDNLWHLGKVRPESVLTPIHGPAWGYRYRARLAVRHVAKKGTVLVGFHERKSRYIADMHTCKILPPHVDALLMPLRELIGAMAARDTCPQIELACGDEVTVLVLRHLEPLSSGDRDRLRAFGRRHGVQWWLQPKGPDSAQPLDEGGAPLCYRLPDFGITIAFRPTDFTQVNPQINRVLVGRALRLLDPRKTDRVIDWFCGLGNFTLPLATQAGHVLGVEGSAALIARARENFVSNQAQSLAGQALAATEFEVRNLFEITAPELVAHGPAQRWLIDPPREGAFALVKALADIHQARLGTEGAPELSADARAWQAPERIVYVSCNPATLSRDAGLLVHQAGYRCTAAGVINMFPHTAHVESMAVFERMA*