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QH_2_UNK

In projects: QH_2  |  diaphorachaeota

Metagenomic Context

METAGENOME

Properties

Avg. coverage: 20.77 Longest contig: 62.94 Kbp Bin length: 51.65 Mbp GC content: 61.28 %
Contigs count: 21073 Features count: 67835 rRNAs count: 15 tRNAs count: 624

Genome completeness

megabin RP 54 / 55 MC: 47 BSCG 45 / 51 MC: 42 ASCG 38 / 38 MC: 38
Displaying items 501-550 of 21073 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
qh_2_scaffold_20378
Species: Halosimplex carlsbadense (100%)
2 1140 bp 67.37 9.39 100.26
qh_2_scaffold_13527
Species: Haloferax sp. ATCC BAA-645 (50%)
2 1526 bp 47.90 5.70 100.26
qh_2_scaffold_20069
Species: Rhodococcus sp. AD45 (50%)
2 1152 bp 61.28 16.93 100.26
qh_2_scaffold_20075
Species: Halorubrum hochstenium (50%)
2 1152 bp 70.05 7.38 100.26
qh_2_scaffold_20009 2 1155 bp 55.67 5.54 100.26
qh_2_scaffold_19943
Species: Halococcus hamelinensis (50%)
2 1158 bp 72.88 12.18 100.26
qh_2_scaffold_22538
Order: Halobacteriales (66.67%)
3 1565 bp 74.95 11.63 100.26
qh_2_scaffold_26220
Species: Natronomonas moolapensis (50%)
2 1571 bp 72.88 17.50 100.26
qh_2_scaffold_9169
Species: Natronomonas moolapensis (100%)
2 1966 bp 71.82 11.44 100.25
qh_2_scaffold_18901
Species: Halostagnicola sp. A56 (50%)
2 1203 bp 64.34 38.99 100.25
qh_2_scaffold_24339
Species: Halonotius sp. J07HN4 (50%)
2 1607 bp 70.26 19.60 100.25
qh_2_scaffold_28793
Species: Haloquadratum walsbyi (100%)
2 1613 bp 55.36 5.15 100.25
qh_2_scaffold_18395
Species: Natronomonas pharaonis (50%)
2 1227 bp 69.52 38.39 100.24
qh_2_scaffold_12115
Species: Rhodospirillum rubrum (50%)
2 1640 bp 60.37 6.52 100.24
qh_2_scaffold_12094
Species: uncultured marine microorganism HF4000_APKG10K24 (50%)
2 1643 bp 71.58 9.31 100.24
qh_2_scaffold_18098
Species: Corynebacterium ulcerans (50%)
2 1242 bp 50.32 6.44 100.24
qh_2_scaffold_11909 3 1661 bp 57.86 7.10 100.24
qh_2_scaffold_11843
Species: Halococcus saccharolyticus (50%)
2 1667 bp 64.07 9.78 100.24
qh_2_scaffold_17803
Species: Salinarchaeum sp. Harcht-Bsk1 (50%)
2 1257 bp 63.88 9.94 100.24
qh_2_scaffold_11594
Species: Halococcus salifodinae (100%)
2 1691 bp 69.96 15.38 100.24
qh_2_scaffold_7932
Species: Haloquadratum walsbyi (100%)
2 2149 bp 50.12 16.33 100.23
qh_2_scaffold_13710 4 2152 bp 57.81 6.04 100.23
qh_2_scaffold_16932
Species: Haloferax denitrificans (100%)
2 1302 bp 64.52 12.75 100.23
qh_2_scaffold_7696
Species: Natronomonas pharaonis (100%)
2 2188 bp 64.72 9.41 100.23
qh_2_scaffold_10913
Species: Halorhabdus utahensis (50%)
2 1760 bp 70.63 14.60 100.23
qh_2_scaffold_33902
Species: Haloarcula sinaiiensis (50%)
2 1332 bp 78.60 38.68 100.23
qh_2_scaffold_16032
Species: Halobiforma lacisalsi (50%)
2 1353 bp 69.40 13.30 100.22
qh_2_scaffold_15887
Species: Haloarcula vallismortis (100%)
2 1362 bp 61.75 20.19 100.22
qh_2_scaffold_10384
Species: Natrialba chahannaoensis (50%)
2 1820 bp 75.11 52.42 100.22
qh_2_scaffold_15603
Species: Halococcus salifodinae (100%)
2 1380 bp 66.67 11.96 100.22
qh_2_scaffold_15509
Species: Erythrobacter litoralis (50%)
2 1386 bp 64.79 8.95 100.22
qh_2_scaffold_30754
Species: Halococcus salifodinae (100%)
2 1395 bp 67.89 12.54 100.22
qh_2_scaffold_16214
Species: Halomicrobium mukohataei (50%)
2 1889 bp 68.40 30.86 100.21
qh_2_scaffold_23627
Species: Natronobacterium gregoryi (50%)
2 1419 bp 69.91 72.09 100.21
qh_2_scaffold_9570
Order: Halobacteriales (66.67%)
3 1910 bp 65.65 15.03 100.21
qh_2_scaffold_9509
Species: Haloferax mediterranei (50%)
2 1919 bp 67.85 37.47 100.21
qh_2_scaffold_14377
Species: Halosimplex carlsbadense (50%)
2 1461 bp 66.26 26.42 100.21
qh_2_scaffold_26981
Species: Natronomonas pharaonis (50%)
2 1467 bp 71.03 15.81 100.21
qh_2_scaffold_6313
Species: Oscillatoria nigro-viridis (50%)
2 2473 bp 50.55 4.49 100.20
qh_2_scaffold_13981
Species: Candidatus Halobonum tyrrellensis (66.67%)
3 1491 bp 76.66 23.00 100.20
qh_2_scaffold_6235
Species: Halococcus salifodinae (100%)
3 2491 bp 69.77 14.05 100.20
qh_2_scaffold_24250
Species: Natrinema gari (50%)
2 1003 bp 51.74 6.88 100.20
qh_2_scaffold_13746
Species: Haloarcula vallismortis (50%)
2 1509 bp 56.20 10.60 100.20
qh_2_scaffold_13595
Species: Halococcus saccharolyticus (100%)
2 1521 bp 67.98 11.77 100.20
qh_2_scaffold_23878
Species: Halomicrobium mukohataei (50%)
2 1015 bp 75.76 21.97 100.20
qh_2_scaffold_13515
Species: Pedobacter heparinus (50%)
2 1527 bp 66.73 11.98 100.20
qh_2_scaffold_23765
Species: Halorubrum coriense (100%)
2 1018 bp 63.56 9.53 100.20
qh_2_scaffold_23778
Species: CG_Delta_06 (50%)
2 1018 bp 57.76 6.29 100.20
qh_2_scaffold_23782
Species: halophilic archaeon J07HX64 (50%)
2 1018 bp 67.29 14.24 100.20
qh_2_scaffold_23785
Species: Natronomonas pharaonis (50%)
2 1018 bp 65.23 12.38 100.20
Displaying items 501-550 of 21073 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.