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QH_2_UNK

In projects: QH_2  |  diaphorachaeota

Metagenomic Context

METAGENOME

Properties

Avg. coverage: 20.77 Longest contig: 62.94 Kbp Bin length: 51.65 Mbp GC content: 61.28 %
Contigs count: 21073 Features count: 67835 rRNAs count: 15 tRNAs count: 624

Genome completeness

megabin RP 54 / 55 MC: 47 BSCG 45 / 51 MC: 42 ASCG 38 / 38 MC: 38
Displaying items 551-600 of 21073 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
qh_2_scaffold_23665
Species: Halorubrum lacusprofundi (100%)
2 1021 bp 47.60 4.51 100.20
qh_2_scaffold_23676
Species: Halococcus salifodinae (100%)
2 1021 bp 67.78 18.22 100.20
qh_2_scaffold_23587
Species: Halorhabdus utahensis (100%)
2 1024 bp 66.11 9.67 100.20
qh_2_scaffold_13305 2 1542 bp 60.25 5.77 100.20
qh_2_scaffold_8485
Species: Natrinema versiforme (50%)
2 2063 bp 75.42 52.16 100.19
qh_2_scaffold_23317
Species: Natronomonas moolapensis (50%)
2 1033 bp 67.09 27.78 100.19
qh_2_scaffold_23325 2 1033 bp 46.18 4.94 100.19
qh_2_scaffold_13205
Species: Natronomonas pharaonis (50%)
4 1551 bp 71.24 46.94 100.19
qh_2_scaffold_23227
Species: Halopiger xanaduensis (50%)
2 1036 bp 53.67 6.47 100.19
qh_2_scaffold_23231
Species: Natronococcus amylolyticus (50%)
2 1036 bp 64.00 8.01 100.19
qh_2_scaffold_5831
Domain: Archaea (66.67%)
3 2590 bp 40.35 5.29 100.19
qh_2_scaffold_13119
Species: Halomicrobium mukohataei (50%)
2 1557 bp 67.76 21.71 100.19
qh_2_scaffold_23127 2 1039 bp 56.11 10.39 100.19
qh_2_scaffold_8374
Species: Natrinema gari (50%)
2 2078 bp 62.66 17.42 100.19
qh_2_scaffold_13049
Species: Halococcus saccharolyticus (50%)
2 1563 bp 66.22 11.64 100.19
qh_2_scaffold_22970
Species: Halococcus salifodinae (50%)
2 1045 bp 67.46 10.91 100.19
qh_2_scaffold_12968
Species: Natronomonas pharaonis (50%)
2 1569 bp 73.80 29.32 100.19
qh_2_scaffold_12926
Species: Haloferax volcanii (50%)
2 1572 bp 47.58 7.19 100.19
qh_2_scaffold_12897
Species: Haladaptatus paucihalophilus (100%)
2 1575 bp 71.62 10.03 100.19
qh_2_scaffold_12785
Species: Halovivax ruber (50%)
2 1584 bp 57.13 5.24 100.19
qh_2_scaffold_22433
Species: Natrialba chahannaoensis (50%)
2 1063 bp 68.67 25.49 100.19
qh_2_scaffold_22172
Species: Natronomonas pharaonis (50%)
2 1072 bp 71.64 20.43 100.19
qh_2_scaffold_7938 2 2147 bp 53.47 6.66 100.19
qh_2_scaffold_23673
Species: Natronomonas pharaonis (50%)
2 1611 bp 72.07 25.26 100.19
qh_2_scaffold_21983
Species: RBG_16_OP11_Gottesmanbacteria_43_7_curated (50%)
2 1078 bp 46.57 5.38 100.19
qh_2_scaffold_21985
Species: Halorubrum terrestre (50%)
2 1078 bp 68.37 15.31 100.19
qh_2_scaffold_12380
Species: Halococcus saccharolyticus (50%)
2 1617 bp 75.20 12.43 100.19
qh_2_scaffold_21819
Species: Natronorubrum bangense (50%)
2 1084 bp 55.54 11.81 100.18
qh_2_scaffold_21835
Species: Haloquadratum walsbyi (50%)
2 1084 bp 54.89 4.89 100.18
qh_2_scaffold_12273
Species: Methanosalsum zhilinae (50%)
2 1626 bp 57.38 6.09 100.18
qh_2_scaffold_24515
Species: Halomicrobium mukohataei (50%)
2 1635 bp 71.93 45.02 100.18
qh_2_scaffold_21666
Species: Salinibacter ruber (50%)
2 1090 bp 68.26 5.32 100.18
qh_2_scaffold_12131 4 1638 bp 55.01 6.23 100.18
qh_2_scaffold_40868
Species: Haladaptatus paucihalophilus (50%)
2 1102 bp 61.89 12.98 100.18
qh_2_scaffold_12387
Order: Natrialbales (66.67%)
3 2204 bp 68.38 13.25 100.18
qh_2_scaffold_3845
Species: Halorubrum coriense (66.67%)
3 3309 bp 70.02 14.32 100.18
qh_2_scaffold_11947
Species: Salinibacter ruber (100%)
2 1656 bp 66.36 24.64 100.18
qh_2_scaffold_11956
Species: Natronomonas pharaonis (50%)
2 1656 bp 65.64 14.79 100.18
qh_2_scaffold_21201
Species: Candidatus Halobonum tyrrellensis (50%)
2 1108 bp 74.64 7.40 100.18
qh_2_scaffold_11667
Species: Natronorubrum bangense (50%)
2 1683 bp 58.76 7.43 100.18
qh_2_scaffold_20824
Species: RBG_19FT_COMBO_Chloroflexi_56_12_curated (50%)
2 1123 bp 58.41 9.08 100.18
qh_2_scaffold_27863
Species: Halosimplex carlsbadense (100%)
3 1698 bp 70.08 45.17 100.18
qh_2_scaffold_11389
Species: Haloarcula hispanica (50%)
2 1710 bp 68.65 18.42 100.18
qh_2_scaffold_20280
Species: Halorhabdus tiamatea (50%)
2 1144 bp 73.34 43.71 100.18
qh_2_scaffold_5296
Species: Listeria rocourtiae (50%)
2 3468 bp 66.29 24.74 100.17
qh_2_scaffold_19986
Species: Haloquadratum walsbyi (100%)
2 1156 bp 62.46 11.25 100.17
qh_2_scaffold_19824
Species: Halococcus saccharolyticus (50%)
2 1162 bp 71.43 13.94 100.17
qh_2_scaffold_19749
Species: Natrialba hulunbeirensis (50%)
2 1165 bp 58.20 12.27 100.17
qh_2_scaffold_27498
Species: Salinibacter ruber (50%)
2 1770 bp 57.23 6.89 100.17
qh_2_scaffold_3369
Species: Haloarcula vallismortis (50%)
2 3555 bp 62.59 22.87 100.17
Displaying items 551-600 of 21073 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.