ggKbase home page
Advanced Search
Search Help

QH_2_UNK

In projects: QH_2  |  diaphorachaeota

Metagenomic Context

METAGENOME

Properties

Avg. coverage: 20.77 Longest contig: 62.94 Kbp Bin length: 51.65 Mbp GC content: 61.28 %
Contigs count: 21073 Features count: 67835 rRNAs count: 15 tRNAs count: 624

Genome completeness

megabin RP 54 / 55 MC: 47 BSCG 45 / 51 MC: 42 ASCG 38 / 38 MC: 38
Displaying items 601-650 of 21073 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
qh_2_scaffold_10731
Order: Halobacteriales (66.67%)
3 1779 bp 70.21 9.22 100.17
qh_2_scaffold_19207
Species: Halomicrobium mukohataei (50%)
2 1189 bp 66.78 38.69 100.17
qh_2_scaffold_19218 2 1189 bp 51.14 4.54 100.17
qh_2_scaffold_10648
Species: Halococcus thailandensis (100%)
2 1788 bp 55.59 11.86 100.17
qh_2_scaffold_18864
Species: Halomicrobium mukohataei (50%)
2 1204 bp 66.61 14.45 100.17
qh_2_scaffold_18884
Species: Haladaptatus paucihalophilus (50%)
2 1204 bp 71.93 7.81 100.17
qh_2_scaffold_18760
Species: Halococcus saccharolyticus (50%)
2 1210 bp 58.18 7.85 100.16
qh_2_scaffold_18610
Species: Cyanothece sp. PCC 7424 (50%)
2 1216 bp 65.79 8.96 100.16
qh_2_scaffold_18555
Species: Halococcus salifodinae (100%)
3 1219 bp 71.78 12.06 100.16
qh_2_scaffold_10234
Species: Haladaptatus paucihalophilus (100%)
2 1836 bp 73.37 9.91 100.16
qh_2_scaffold_18128
Species: Halosimplex carlsbadense (100%)
2 1240 bp 63.23 7.58 100.16
qh_2_scaffold_18137
Species: Natronococcus amylolyticus (50%)
2 1240 bp 53.15 6.29 100.16
qh_2_scaffold_18071
Species: Natronorubrum tibetense (50%)
2 1243 bp 48.83 4.26 100.16
qh_2_scaffold_9832
Species: Candidatus Halobonum tyrrellensis (50%)
2 1878 bp 69.33 18.53 100.16
qh_2_scaffold_17845
Species: halophilic archaeon J07HX64 (50%)
2 1255 bp 54.10 6.06 100.16
qh_2_scaffold_17846
Species: halophilic archaeon J07HX64 (50%)
2 1255 bp 72.43 55.78 100.16
qh_2_scaffold_17774
Species: Halonotius sp. J07HN4 (50%)
2 1258 bp 64.55 17.25 100.16
qh_2_scaffold_9735
Species: Natronomonas pharaonis (100%)
2 1890 bp 72.49 14.34 100.16
qh_2_scaffold_6007 3 2546 bp 58.80 5.89 100.16
qh_2_scaffold_17446
Species: Halosimplex carlsbadense (50%)
2 1276 bp 71.63 16.38 100.16
qh_2_scaffold_17390 2 1279 bp 55.36 7.19 100.16
qh_2_scaffold_17333
Species: Natronococcus amylolyticus (50%)
2 1282 bp 72.15 12.87 100.16
qh_2_scaffold_17220
Species: Halosimplex carlsbadense (50%)
2 1288 bp 69.80 18.32 100.16
qh_2_scaffold_30043
Species: Haladaptatus paucihalophilus (50%)
2 1291 bp 69.17 13.48 100.16
qh_2_scaffold_9376
Species: Natronomonas pharaonis (50%)
2 1938 bp 66.15 25.54 100.16
qh_2_scaffold_15667
Species: Xanthomonas fuscans (50%)
2 1941 bp 53.07 6.75 100.16
qh_2_scaffold_17086
Species: Halobiforma lacisalsi (50%)
2 1294 bp 55.18 4.56 100.16
qh_2_scaffold_9307
Species: Natronococcus amylolyticus (50%)
2 1947 bp 60.86 17.57 100.15
qh_2_scaffold_16970
Species: Halococcus thailandensis (100%)
2 1300 bp 61.92 10.38 100.15
qh_2_scaffold_16810
Species: Salinarchaeum sp. Harcht-Bsk1 (100%)
2 1309 bp 57.37 6.19 100.15
qh_2_scaffold_16754
Species: Halococcus salifodinae (50%)
2 1312 bp 67.00 14.41 100.15
qh_2_scaffold_16719
Species: uncultured archaeon A07HR67 (50%)
2 1315 bp 68.14 62.89 100.15
qh_2_scaffold_16720
Species: Natronomonas moolapensis (50%)
2 1315 bp 61.60 21.14 100.15
qh_2_scaffold_2719
Species: Haloferax larsenii (100%)
3 3996 bp 54.80 8.28 100.15
qh_2_scaffold_16013
Species: Haloferax elongans (50%)
2 1354 bp 68.76 10.34 100.15
qh_2_scaffold_8714
Species: Natronomonas moolapensis (100%)
2 2031 bp 68.49 41.36 100.15
qh_2_scaffold_15879
Species: Haloferax larsenii (50%)
2 1363 bp 64.34 14.67 100.15
qh_2_scaffold_15684 2 1375 bp 50.84 5.24 100.15
qh_2_scaffold_15646
Species: Halosimplex carlsbadense (100%)
2 1378 bp 66.76 23.15 100.15
qh_2_scaffold_15647
Species: uncultured archaeon A07HR67 (50%)
2 1378 bp 71.12 16.55 100.15
qh_2_scaffold_8364
Species: Natronomonas moolapensis (100%)
2 2079 bp 73.50 57.34 100.14
qh_2_scaffold_8251
Species: Halorhabdus tiamatea (50%)
2 2097 bp 63.90 14.02 100.14
qh_2_scaffold_8213
Species: Halorubrum sp. J07HR59 (75%)
4 2103 bp 66.76 8.32 100.14
qh_2_scaffold_30554
Species: uncultured archaeon A07HR67 (50%)
2 1429 bp 55.91 5.67 100.14
qh_2_scaffold_14817
Species: Haloferax elongans (50%)
2 1429 bp 65.22 26.59 100.14
qh_2_scaffold_14671 4 1438 bp 41.72 5.15 100.14
qh_2_scaffold_7852
Order: Halobacteriales (66.67%)
3 2160 bp 65.60 15.28 100.14
qh_2_scaffold_14600
Species: Natrinema versiforme (100%)
2 1444 bp 59.28 7.48 100.14
qh_2_scaffold_23716
Order: Halobacteriales (66.67%)
3 1459 bp 72.58 13.71 100.14
qh_2_scaffold_13499
Species: Natronomonas pharaonis (50%)
2 1528 bp 71.40 20.35 100.13
Displaying items 601-650 of 21073 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.