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QH_2_UNK

In projects: QH_2  |  diaphorachaeota

Metagenomic Context

METAGENOME

Properties

Avg. coverage: 20.77 Longest contig: 62.94 Kbp Bin length: 51.65 Mbp GC content: 61.28 %
Contigs count: 21073 Features count: 67835 rRNAs count: 15 tRNAs count: 624

Genome completeness

megabin RP 54 / 55 MC: 47 BSCG 45 / 51 MC: 42 ASCG 38 / 38 MC: 38
Displaying items 301-350 of 21073 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
qh_2_scaffold_32911
Species: Natronomonas moolapensis (66.67%)
3 1831 bp 72.86 55.43 100.60
qh_2_scaffold_23925
Class: Halobacteria (66.67%)
3 1014 bp 61.34 6.11 100.59
qh_2_scaffold_19247
Species: Natronomonas moolapensis (66.67%)
3 1187 bp 70.60 52.74 100.59
qh_2_scaffold_13512
Species: Natronomonas pharaonis (66.67%)
3 1527 bp 69.55 25.34 100.59
qh_2_scaffold_11544
Species: Halobacterium sp. DL1 (66.67%)
3 1697 bp 66.59 10.55 100.59
qh_2_scaffold_20302 2 1879 bp 56.04 5.59 100.59
qh_2_scaffold_11730
Species: Salinibacter ruber (100%)
4 2905 bp 63.24 86.49 100.59
qh_2_scaffold_23333
Species: Salinarchaeum sp. Harcht-Bsk1 (50%)
2 1032 bp 56.69 4.55 100.58
qh_2_scaffold_20587
Species: Natrinema gari (50%)
2 2067 bp 45.57 6.29 100.58
qh_2_scaffold_9677
Species: sediment metagenome (66.67%)
3 1897 bp 63.21 37.64 100.58
qh_2_scaffold_23257 4 1035 bp 51.88 6.57 100.58
qh_2_scaffold_15587
Species: Halococcus salifodinae (100%)
2 1381 bp 67.99 12.96 100.58
qh_2_scaffold_11209
Class: Halobacteria (100%)
3 1730 bp 66.47 13.18 100.58
qh_2_scaffold_16406
Class: Halobacteria (66.67%)
3 2249 bp 68.30 12.72 100.58
qh_2_scaffold_11689
Species: Salinibacter ruber (66.67%)
3 3293 bp 66.99 78.38 100.58
qh_2_scaffold_22996
Species: Rhodothermus marinus (100%)
2 1044 bp 67.91 7.38 100.57
qh_2_scaffold_22821
Species: Natronomonas pharaonis (100%)
2 1050 bp 68.00 21.81 100.57
qh_2_scaffold_18427
Species: Natronomonas pharaonis (50%)
2 1226 bp 73.57 23.33 100.57
qh_2_scaffold_15754
Phylum: Proteobacteria (66.67%)
3 1927 bp 58.59 5.45 100.57
qh_2_scaffold_18354
Species: Natrialba asiatica (50%)
2 1229 bp 64.36 8.06 100.57
qh_2_scaffold_18276
Species: Cylindrospermum stagnale (50%)
2 1232 bp 48.30 50.32 100.57
qh_2_scaffold_22458
Species: Halococcus hamelinensis (50%)
2 1062 bp 59.32 7.16 100.57
qh_2_scaffold_22196
Species: Natronomonas pharaonis (50%)
2 1071 bp 71.24 30.44 100.56
qh_2_scaffold_14831
Species: RBG_16_KB1_OP1_55_9_curated (50%)
2 1429 bp 56.54 5.60 100.56
qh_2_scaffold_7836
Species: Halomicrobium mukohataei (50%)
2 2163 bp 70.09 10.22 100.55
qh_2_scaffold_17644
Species: Halogeometricum borinquense (50%)
2 1265 bp 71.78 16.76 100.55
qh_2_scaffold_21513 2 1095 bp 61.28 6.12 100.55
qh_2_scaffold_17317
Species: Natronomonas pharaonis (50%)
2 1283 bp 69.84 43.02 100.55
qh_2_scaffold_10240
Species: Natronomonas moolapensis (66.67%)
3 1835 bp 78.09 62.67 100.55
qh_2_scaffold_17151
Genus: Haloterrigena (66.67%)
3 1292 bp 69.04 32.43 100.54
qh_2_scaffold_10100
Species: Halorubrum tebenquichense (50%)
2 1850 bp 73.95 20.76 100.54
qh_2_scaffold_30425
Species: Natronomonas pharaonis (100%)
2 1316 bp 71.05 19.30 100.53
qh_2_scaffold_16655 3 1319 bp 50.49 5.38 100.53
qh_2_scaffold_36314
Species: Salinibacter ruber (50%)
4 1322 bp 64.15 41.23 100.53
qh_2_scaffold_20363
Genus: Haloferax (100%)
3 1140 bp 68.95 10.53 100.53
qh_2_scaffold_16393
Species: Haloferax larsenii (50%)
2 1334 bp 58.10 25.19 100.52
qh_2_scaffold_9620
Genus: Halococcus (80%)
5 2546 bp 68.54 16.65 100.51
qh_2_scaffold_19506
Species: Natronomonas moolapensis (100%)
3 1176 bp 70.66 28.49 100.51
qh_2_scaffold_29434
Species: Hymenobacter swuensis (100%)
2 1373 bp 54.33 4.52 100.51
qh_2_scaffold_19105 3 1194 bp 40.03 8.04 100.50
qh_2_scaffold_3672
Species: Listeriaceae bacterium FSL A5-0209 (50%)
2 3391 bp 66.91 56.44 100.50
qh_2_scaffold_19036
Species: Natronorubrum bangense (66.67%)
3 1197 bp 56.81 8.60 100.50
qh_2_scaffold_19959
Species: Indibacter alkaliphilus (50%)
2 2000 bp 66.50 12.05 100.50
qh_2_scaffold_12495
Species: Natronomonas moolapensis (50%)
2 1609 bp 56.37 15.35 100.50
qh_2_scaffold_12450
Species: Haladaptatus paucihalophilus (100%)
2 1612 bp 67.12 10.79 100.50
qh_2_scaffold_7365
Phylum: Bacteroidetes (66.67%)
3 2248 bp 66.73 14.55 100.49
qh_2_scaffold_23143
Species: Halorubrum litoreum (50%)
2 1039 bp 46.87 3.56 100.48
qh_2_scaffold_11851
Species: R_Deltaproteobacteria_46_8 (50%)
2 1666 bp 60.68 4.14 100.48
qh_2_scaffold_22973
Species: halophilic archaeon J07HB67 (50%)
2 1045 bp 71.96 16.17 100.48
qh_2_scaffold_26024
Species: Halarchaeum acidiphilum (66.67%)
3 1469 bp 60.72 13.27 100.48
Displaying items 301-350 of 21073 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.