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QH_2_UNK

In projects: QH_2  |  diaphorachaeota

Metagenomic Context

METAGENOME

Properties

Avg. coverage: 20.77 Longest contig: 62.94 Kbp Bin length: 51.65 Mbp GC content: 61.28 %
Contigs count: 21073 Features count: 67835 rRNAs count: 15 tRNAs count: 624

Genome completeness

megabin RP 54 / 55 MC: 47 BSCG 45 / 51 MC: 42 ASCG 38 / 38 MC: 38
Displaying items 351-400 of 21073 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
qh_2_scaffold_8089
Species: Natronomonas moolapensis (75%)
4 2120 bp 77.55 58.21 100.47
qh_2_scaffold_12456 3 2126 bp 55.83 7.29 100.47
qh_2_scaffold_7467
Phylum: Bacteroidetes (50%)
4 2765 bp 61.77 8.90 100.47
qh_2_scaffold_22070
Class: Halobacteria (66.67%)
3 1075 bp 58.23 9.21 100.47
qh_2_scaffold_7318
Order: Haloferacales (66.67%)
3 2822 bp 66.02 9.07 100.46
qh_2_scaffold_25270
Species: Natronomonas moolapensis (100%)
2 1753 bp 54.99 12.66 100.46
qh_2_scaffold_5654 5 2637 bp 61.70 7.13 100.46
qh_2_scaffold_21409
Species: Natrinema pellirubrum (50%)
2 1099 bp 70.06 38.13 100.46
qh_2_scaffold_21421
Species: Haladaptatus paucihalophilus (50%)
2 1099 bp 68.88 9.19 100.46
qh_2_scaffold_16527
Species: Natronomonas moolapensis (50%)
2 1326 bp 67.65 17.65 100.45
qh_2_scaffold_17259
Species: Natrinema pallidum (100%)
2 2013 bp 53.20 12.97 100.45
qh_2_scaffold_12973
Species: Candidatus Halobonum tyrrellensis (50%)
2 1568 bp 70.41 15.75 100.45
qh_2_scaffold_25875
Domain: Archaea (66.67%)
3 1571 bp 74.16 11.78 100.45
qh_2_scaffold_16131
Species: Natronomonas pharaonis (66.67%)
3 1347 bp 67.26 16.48 100.45
qh_2_scaffold_10486
Class: Halobacteria (66.67%)
3 1807 bp 56.83 5.92 100.44
qh_2_scaffold_10464
Species: Natrinema pallidum (50%)
2 1810 bp 63.59 12.27 100.44
qh_2_scaffold_20421
Species: Haloarcula japonica (50%)
2 1138 bp 64.15 8.44 100.44
qh_2_scaffold_7761
Species: Halogeometricum borinquense (75%)
4 2996 bp 61.42 8.04 100.43
qh_2_scaffold_15554
Species: halophilic archaeon DL31 (50%)
2 1383 bp 71.37 12.44 100.43
qh_2_scaffold_6197
Genus: Halorubrum (50%)
4 3689 bp 67.42 37.48 100.43
qh_2_scaffold_8270
Species: Natronomonas pharaonis (60%)
5 2094 bp 65.71 13.85 100.43
qh_2_scaffold_15268 3 1401 bp 67.45 11.49 100.43
qh_2_scaffold_15151
Species: Halococcus salifodinae (50%)
2 1407 bp 67.80 9.67 100.43
qh_2_scaffold_15027
Class: Halobacteria (66.67%)
3 1416 bp 67.66 12.64 100.42
qh_2_scaffold_12003
Species: Natronomonas pharaonis (66.67%)
3 1652 bp 54.66 5.08 100.42
qh_2_scaffold_32175 3 1416 bp 55.72 6.21 100.42
qh_2_scaffold_14883 3 1425 bp 58.74 23.37 100.42
qh_2_scaffold_9551
Class: Halobacteria (66.67%)
3 1912 bp 71.76 29.55 100.42
qh_2_scaffold_6571
Species: Halosimplex carlsbadense (100%)
5 2420 bp 67.52 14.79 100.41
qh_2_scaffold_14387
Species: Halogranum salarium (50%)
2 2438 bp 68.54 10.79 100.41
qh_2_scaffold_31004
Class: Halobacteria (66.67%)
3 1718 bp 70.55 36.61 100.41
qh_2_scaffold_14204
Species: Haloterrigena thermotolerans (100%)
2 1473 bp 73.52 10.73 100.41
qh_2_scaffold_14205
Species: Haloferax prahovense (50%)
2 1473 bp 55.33 8.55 100.41
qh_2_scaffold_10983
Order: Halobacteriales (60%)
5 2486 bp 64.84 13.03 100.40
qh_2_scaffold_11070
Species: Haloarcula vallismortis (50%)
2 1745 bp 69.86 14.67 100.40
qh_2_scaffold_24300
Species: Natronomonas pharaonis (50%)
2 1001 bp 75.72 34.67 100.40
qh_2_scaffold_24137
Species: Halostagnicola sp. A56 (50%)
2 1007 bp 69.81 6.36 100.40
qh_2_scaffold_14694 2 2770 bp 55.56 6.17 100.40
qh_2_scaffold_24055
Species: Halalkalicoccus jeotgali (50%)
2 1010 bp 70.59 11.09 100.40
qh_2_scaffold_17662 3 1264 bp 65.27 10.52 100.40
qh_2_scaffold_23728
Species: Natronomonas pharaonis (50%)
2 1019 bp 72.72 45.63 100.39
qh_2_scaffold_17558
Species: Kitasatospora setae (50%)
2 1784 bp 71.02 39.84 100.39
qh_2_scaffold_23360
Species: Rhodothermus marinus (100%)
2 1031 bp 64.50 9.89 100.39
qh_2_scaffold_23376
Species: Haloarcula californiae (50%)
2 1031 bp 68.09 20.85 100.39
qh_2_scaffold_13084
Species: GWC2_Gemmatimonadetes_71_10_curated (50%)
2 1560 bp 63.59 16.22 100.38
qh_2_scaffold_16981
Species: Salinarchaeum sp. Harcht-Bsk1 (50%)
2 1300 bp 69.15 28.92 100.38
qh_2_scaffold_10388
Species: Natronolimnobius innermongolicus (50%)
2 1820 bp 61.43 6.81 100.38
qh_2_scaffold_22917
Species: Natronomonas moolapensis (100%)
2 1046 bp 72.28 17.69 100.38
qh_2_scaffold_9433
Class: Halobacteria (66.67%)
3 3147 bp 71.75 28.44 100.38
qh_2_scaffold_16761
Species: Halorubrum coriense (50%)
2 1312 bp 65.78 19.28 100.38
Displaying items 351-400 of 21073 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.