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QH_2_UNK

In projects: QH_2  |  diaphorachaeota

Metagenomic Context

METAGENOME

Properties

Avg. coverage: 20.77 Longest contig: 62.94 Kbp Bin length: 51.65 Mbp GC content: 61.28 %
Contigs count: 21073 Features count: 67835 rRNAs count: 15 tRNAs count: 624

Genome completeness

megabin RP 54 / 55 MC: 47 BSCG 45 / 51 MC: 42 ASCG 38 / 38 MC: 38
Displaying items 401-450 of 21073 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
qh_2_scaffold_22739
Species: Haloferax mucosum (50%)
2 1052 bp 62.45 9.51 100.38
qh_2_scaffold_12775
Species: Haloferax prahovense (100%)
2 1584 bp 50.88 6.00 100.38
qh_2_scaffold_8141
Species: Halosimplex carlsbadense (75%)
4 2113 bp 68.81 17.79 100.38
qh_2_scaffold_16610
Species: Haliscomenobacter hydrossis (50%)
2 1321 bp 45.87 5.68 100.38
qh_2_scaffold_10044
Domain: Bacteria (100%)
3 1856 bp 58.46 15.09 100.38
qh_2_scaffold_16400
Species: Halorhabdus utahensis (50%)
2 1333 bp 63.84 19.58 100.37
qh_2_scaffold_22317
Species: Halorubrum coriense (50%)
2 1067 bp 72.16 13.50 100.37
qh_2_scaffold_22321
Species: Natronomonas moolapensis (100%)
2 1067 bp 71.88 21.74 100.37
qh_2_scaffold_22214
Species: Halogeometricum borinquense (50%)
2 1070 bp 58.97 28.04 100.37
qh_2_scaffold_22123 2 1073 bp 57.97 5.31 100.37
qh_2_scaffold_16169
Species: Halovivax asiaticus (50%)
2 1345 bp 51.30 6.10 100.37
qh_2_scaffold_9785
Species: Haloferax sp. ATCC BAA-645 (50%)
2 1883 bp 50.56 13.81 100.37
qh_2_scaffold_44543
Species: Haloarcula californiae (50%)
2 1082 bp 72.92 12.11 100.37
qh_2_scaffold_21786
Species: Haloterrigena thermotolerans (50%)
2 1085 bp 65.99 69.68 100.37
qh_2_scaffold_21811
Species: Halococcus morrhuae (50%)
2 1085 bp 63.23 14.47 100.37
qh_2_scaffold_21711
Species: Salinarchaeum sp. Harcht-Bsk1 (50%)
2 1088 bp 63.60 6.99 100.37
qh_2_scaffold_15785
Species: Natronorubrum bangense (100%)
2 1369 bp 70.49 8.91 100.37
qh_2_scaffold_21475
Species: Halosimplex carlsbadense (100%)
2 1097 bp 69.64 11.94 100.37
qh_2_scaffold_5990
Domain: Bacteria (50%)
4 3841 bp 43.66 5.83 100.36
qh_2_scaffold_21317
Species: Halosimplex carlsbadense (100%)
2 1103 bp 70.26 12.24 100.36
qh_2_scaffold_45840
Species: Acidithrix ferrooxidans (50%)
2 1106 bp 72.97 7.50 100.36
qh_2_scaffold_21251
Species: Haloarcula argentinensis (50%)
2 1106 bp 71.52 12.84 100.36
qh_2_scaffold_21178
Species: Natronococcus amylolyticus (100%)
2 1109 bp 67.72 8.21 100.36
qh_2_scaffold_25652
Species: uncultured archaeon A07HR60 (66.67%)
3 1671 bp 67.32 14.30 100.36
qh_2_scaffold_20693
Class: Halobacteria (66.67%)
3 1127 bp 66.64 12.24 100.35
qh_2_scaffold_14968
Order: Natrialbales (66.67%)
3 1420 bp 70.21 8.52 100.35
qh_2_scaffold_27158
Genus: Haloferax (66.67%)
3 1423 bp 67.25 18.69 100.35
qh_2_scaffold_42796 2 1139 bp 58.03 5.88 100.35
qh_2_scaffold_23245
Phylum: Proteobacteria (66.67%)
3 1719 bp 54.45 5.47 100.35
qh_2_scaffold_7162
Species: Halarchaeum acidiphilum (66.67%)
3 2293 bp 56.91 6.93 100.35
qh_2_scaffold_8871
Species: Halobiforma lacisalsi (100%)
2 2009 bp 72.42 26.73 100.35
qh_2_scaffold_19962
Species: Halovivax ruber (50%)
2 1157 bp 70.18 10.72 100.35
qh_2_scaffold_19721
Species: Halothece sp. PCC 7418 (50%)
2 1166 bp 42.71 7.03 100.34
qh_2_scaffold_10995
Species: Natronomonas moolapensis (100%)
3 1752 bp 66.72 42.29 100.34
qh_2_scaffold_5679
Order: Halobacteriales (66.67%)
6 2631 bp 66.89 46.48 100.34
qh_2_scaffold_19463 2 1178 bp 70.03 6.37 100.34
qh_2_scaffold_19118
Species: Halococcus saccharolyticus (50%)
2 1193 bp 66.89 18.94 100.34
qh_2_scaffold_18916
Species: Natronomonas pharaonis (50%)
2 1202 bp 68.89 25.12 100.33
qh_2_scaffold_27685
Species: uncultured archaeon A07HR60 (50%)
2 1217 bp 73.95 31.72 100.33
qh_2_scaffold_22389
Species: uncultured archaeon A07HB70 (66.67%)
3 1522 bp 65.31 15.05 100.33
qh_2_scaffold_18644 4 1827 bp 65.13 9.30 100.33
qh_2_scaffold_18420
Species: Natronomonas moolapensis (100%)
2 1226 bp 69.74 17.54 100.33
qh_2_scaffold_10037
Species: Natronolimnobius innermongolicus (50%)
2 1857 bp 65.21 8.56 100.32
qh_2_scaffold_18104
Species: Haloterrigena turkmenica (50%)
2 1241 bp 69.54 31.02 100.32
qh_2_scaffold_12669
Domain: Bacteria (66.67%)
3 1594 bp 63.30 8.28 100.31
qh_2_scaffold_17427
Species: Halostagnicola sp. A56 (50%)
2 1277 bp 65.31 43.93 100.31
qh_2_scaffold_12565
Species: Haloferax mucosum (100%)
2 1603 bp 68.12 11.48 100.31
qh_2_scaffold_16806
Species: Bacillus sp. 2_A_57_CT2 (50%)
2 1310 bp 69.69 11.68 100.31
qh_2_scaffold_19006
Species: Halorhabdus tiamatea (66.67%)
3 1648 bp 70.69 12.20 100.30
qh_2_scaffold_16331
Species: Natronomonas pharaonis (100%)
2 1337 bp 70.61 35.23 100.30
Displaying items 401-450 of 21073 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.