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QH_6_UNK

In projects: QH_6  |  diaphorachaeota

Metagenomic Context

METAGENOME

Properties

Avg. coverage: 21.84 Longest contig: 86.52 Kbp Bin length: 43.49 Mbp GC content: 61.40 %
Contigs count: 17572 Features count: 56719 rRNAs count: 11 tRNAs count: 537

Genome completeness

megabin RP 45 / 55 MC: 35 BSCG 42 / 51 MC: 35 ASCG 38 / 38 MC: 38
Displaying items 16901-16950 of 17572 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
qh_6_scaffold_12526
Species: Halorubrum saccharovorum (100%)
1 1593 bp 57.06 7.60 43.50
qh_6_scaffold_20818 3 1621 bp 55.21 21.65 43.49
qh_6_scaffold_20856
Species: Candidatus Halobonum tyrrellensis (50%)
2 1077 bp 64.62 13.37 43.45
qh_6_scaffold_21693 2 1043 bp 51.58 4.79 43.43
qh_6_scaffold_22137
Species: Haloarcula hispanica (66.67%)
3 3822 bp 56.86 39.12 43.41
qh_6_scaffold_15985 3 1335 bp 48.24 8.39 43.37
qh_6_scaffold_13426
Species: Haloferax prahovense (50%)
2 1515 bp 59.87 19.08 43.37
qh_6_scaffold_13884 3 1481 bp 39.84 4.25 43.35
qh_6_scaffold_20308
Species: Halosimplex carlsbadense (100%)
1 1101 bp 54.41 5.45 43.32
qh_6_scaffold_6003
Species: Salinibacter ruber (100%)
2 5346 bp 58.34 51.33 43.32
qh_6_scaffold_9620
Species: Halarchaeum acidiphilum (50%)
2 1891 bp 60.02 7.62 43.31
qh_6_scaffold_11990
Species: Halococcus hamelinensis (100%)
1 1644 bp 72.63 8.15 43.25
qh_6_scaffold_6702
Order: Halobacteriales (66.67%)
3 2353 bp 66.89 8.80 43.22
qh_6_scaffold_26761 4 2360 bp 50.89 6.19 43.22
qh_6_scaffold_3558 3 3339 bp 53.94 7.01 43.22
qh_6_scaffold_5238
Species: Salinibacter ruber (100%)
3 3354 bp 66.34 57.51 43.20
qh_6_scaffold_19798 2 1125 bp 52.18 6.67 43.20
qh_6_scaffold_14647
Species: Natronomonas pharaonis (100%)
1 1424 bp 68.05 27.32 43.19
qh_6_scaffold_18518
Species: Haloferax sulfurifontis (50%)
2 1188 bp 59.18 12.12 43.18
qh_6_scaffold_30320
Class: Halobacteria (66.67%)
3 1488 bp 61.16 9.95 43.15
qh_6_scaffold_20209
Species: Natronomonas moolapensis (100%)
1 1106 bp 64.92 14.20 43.13
qh_6_scaffold_15629 3 2261 bp 68.82 17.51 43.12
qh_6_scaffold_13860 2 1482 bp 46.83 5.94 43.12
qh_6_scaffold_16405
Class: Halobacteria (50%)
4 1309 bp 50.73 11.46 43.09
qh_6_scaffold_18741
Species: Rhodothermus marinus (50%)
2 1177 bp 59.05 6.80 43.08
qh_6_scaffold_16634
Species: Halosimplex carlsbadense (50%)
2 1296 bp 66.44 22.76 43.06
qh_6_scaffold_25949
Order: Halobacteriales (66.67%)
3 1317 bp 67.50 12.38 43.05
qh_6_scaffold_10333
Species: Microcoleus sp. PCC 7113 (100%)
1 2265 bp 47.64 64.19 43.05
qh_6_scaffold_29399
Species: Halalkalicoccus jeotgali (50%)
2 1513 bp 70.32 8.66 43.03
qh_6_scaffold_12104
Species: Halococcus thailandensis (50%)
2 1632 bp 58.39 17.89 43.01
qh_6_scaffold_20713
Species: Haloterrigena turkmenica (50%)
2 1082 bp 65.43 29.21 42.98
qh_6_scaffold_13707 1 1495 bp 57.06 12.44 42.94
qh_6_scaffold_9781 3 2529 bp 54.88 5.81 42.94
qh_6_scaffold_20176 3 1768 bp 67.48 44.51 42.93
qh_6_scaffold_31298
Order: Halobacteriales (66.67%)
3 1447 bp 64.89 8.09 42.92
qh_6_scaffold_17579 2 1239 bp 59.32 6.46 42.86
qh_6_scaffold_11006
Class: Halobacteria (66.67%)
3 1737 bp 72.42 11.40 42.83
qh_6_scaffold_20156 1 1108 bp 40.43 5.87 42.78
qh_6_scaffold_20461
Species: Haloferax lucentense (100%)
1 1094 bp 48.72 7.95 42.78
qh_6_scaffold_21231 2 1060 bp 48.87 6.98 42.74
qh_6_scaffold_11036 2 1734 bp 58.13 12.17 42.73
qh_6_scaffold_18828
Species: Halorubrum sp. AJ67 (50%)
2 1173 bp 55.92 24.21 42.71
qh_6_scaffold_21561 2 1047 bp 52.34 7.26 42.69
qh_6_scaffold_14014
Order: Natrialbales (66.67%)
3 1470 bp 54.15 13.27 42.65
qh_6_scaffold_21928 3 1032 bp 58.82 10.17 42.64
qh_6_scaffold_21992 2 1030 bp 47.48 6.31 42.62
qh_6_scaffold_21697
Species: Halosimplex carlsbadense (50%)
2 1042 bp 72.94 9.79 42.61
qh_6_scaffold_22367
Species: Haloquadratum walsbyi (100%)
1 1014 bp 48.42 4.04 42.60
qh_6_scaffold_9917
Class: Halobacteria (50%)
4 1854 bp 65.48 25.19 42.56
qh_6_scaffold_20629 1 1086 bp 55.89 7.18 42.54
Displaying items 16901-16950 of 17572 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.