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QH_6_UNK

In projects: QH_6  |  diaphorachaeota

Metagenomic Context

METAGENOME

Properties

Avg. coverage: 21.84 Longest contig: 86.52 Kbp Bin length: 43.49 Mbp GC content: 61.40 %
Contigs count: 17572 Features count: 56719 rRNAs count: 11 tRNAs count: 537

Genome completeness

megabin RP 45 / 55 MC: 35 BSCG 42 / 51 MC: 35 ASCG 38 / 38 MC: 38
Displaying items 451-500 of 17572 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
qh_6_scaffold_10918
Species: Halosimplex carlsbadense (50%)
2 1746 bp 71.99 11.00 100.17
qh_6_scaffold_18739
Species: Haloferax larsenii (50%)
2 1177 bp 73.75 66.19 100.17
qh_6_scaffold_18046
Species: Candidatus Halobonum tyrrellensis (50%)
2 1767 bp 75.16 12.45 100.17
qh_6_scaffold_18325
Species: Halosimplex carlsbadense (100%)
2 1198 bp 64.94 11.69 100.17
qh_6_scaffold_6518
Species: Natronomonas pharaonis (50%)
4 3004 bp 61.92 22.64 100.17
qh_6_scaffold_33874 2 1210 bp 63.64 7.52 100.16
qh_6_scaffold_10246
Genus: Haloarcula (66.67%)
3 1815 bp 69.31 32.34 100.16
qh_6_scaffold_17830
Species: Halomicrobium mukohataei (50%)
2 1225 bp 66.69 10.29 100.16
qh_6_scaffold_9994
Species: Natronomonas pharaonis (50%)
2 1845 bp 68.62 43.63 100.16
qh_6_scaffold_17720
Species: Halococcus hamelinensis (50%)
2 1231 bp 65.56 10.56 100.16
qh_6_scaffold_17725
Species: Haloarcula californiae (50%)
2 1231 bp 63.04 11.13 100.16
qh_6_scaffold_17664
Species: Halogeometricum pallidum (100%)
2 1234 bp 54.21 5.35 100.16
qh_6_scaffold_17568
Species: Halorhabdus tiamatea (100%)
2 1240 bp 65.73 11.77 100.16
qh_6_scaffold_9872
Species: halophilic archaeon DL31 (50%)
2 1860 bp 69.78 20.32 100.16
qh_6_scaffold_19229
Species: [Cellvibrio] gilvus (50%)
2 1860 bp 68.66 7.26 100.16
qh_6_scaffold_17470
Species: Halogranum salarium (50%)
2 1246 bp 65.49 11.00 100.16
qh_6_scaffold_17411
Species: halophilic archaeon DL31 (50%)
2 1249 bp 72.06 20.34 100.16
qh_6_scaffold_17258
Species: Halosimplex carlsbadense (100%)
2 1258 bp 70.51 8.66 100.16
qh_6_scaffold_9625
Species: Halosimplex carlsbadense (100%)
4 1890 bp 69.52 50.21 100.16
qh_6_scaffold_17125
Species: Haloarcula sinaiiensis (50%)
2 1267 bp 67.64 8.05 100.16
qh_6_scaffold_9518
Species: Natronomonas moolapensis (100%)
2 1905 bp 71.29 57.22 100.16
qh_6_scaffold_9457
Species: Natronolimnobius innermongolicus (50%)
2 1911 bp 75.30 26.32 100.16
qh_6_scaffold_16810
Species: halophilic archaeon J07HX5 (100%)
2 1285 bp 65.76 9.81 100.16
qh_6_scaffold_9257
Species: Natronorubrum tibetense (100%)
2 1938 bp 61.76 23.58 100.16
qh_6_scaffold_5703
Phylum: Bacteroidetes (66.67%)
3 2588 bp 58.19 10.97 100.16
qh_6_scaffold_33506
Species: Halogranum salarium (50%)
2 1300 bp 57.62 12.15 100.15
qh_6_scaffold_16336
Species: Natronomonas pharaonis (50%)
2 1312 bp 73.02 52.06 100.15
qh_6_scaffold_16348
Order: Halobacteriales (66.67%)
3 1312 bp 67.30 24.92 100.15
qh_6_scaffold_27414
Species: Halorubrum aidingense (50%)
2 1312 bp 56.40 9.15 100.15
qh_6_scaffold_32413
Species: Streptomyces aurantiacus (50%)
2 1324 bp 67.90 6.57 100.15
qh_6_scaffold_16110
Species: Haloferax prahovense (50%)
2 1327 bp 60.66 9.04 100.15
qh_6_scaffold_29104
Species: Natronomonas moolapensis (50%)
2 1998 bp 61.76 23.97 100.15
qh_6_scaffold_15928 3 1339 bp 67.96 7.09 100.15
qh_6_scaffold_20383 7 2037 bp 61.51 7.71 100.15
qh_6_scaffold_17073
Species: halophilic archaeon J07HX64 (50%)
2 2049 bp 64.86 87.60 100.15
qh_6_scaffold_15367
Species: Halomicrobium mukohataei (50%)
2 1375 bp 65.31 21.82 100.15
qh_6_scaffold_15372
Species: Halorubrum tebenquichense (50%)
2 1375 bp 72.65 21.24 100.15
qh_6_scaffold_15311
Species: Natronomonas pharaonis (66.67%)
3 1378 bp 73.22 68.94 100.15
qh_6_scaffold_12589
Species: Haloterrigena salina (50%)
2 2079 bp 71.77 86.12 100.14
qh_6_scaffold_8055
Species: Haloarcula vallismortis (50%)
2 2112 bp 69.98 50.57 100.14
qh_6_scaffold_4727
Species: Halosimplex carlsbadense (100%)
2 2882 bp 64.26 37.61 100.14
qh_6_scaffold_14399
Species: Halorubrum saccharovorum (50%)
2 1441 bp 72.17 33.45 100.14
qh_6_scaffold_14364
Species: Halorubrum sp. AJ67 (50%)
2 1444 bp 67.87 10.60 100.14
qh_6_scaffold_14292
Species: Halorubrum aidingense (50%)
2 1450 bp 66.90 19.03 100.14
qh_6_scaffold_14081
Species: Halorhabdus tiamatea (50%)
2 1465 bp 53.99 5.60 100.14
qh_6_scaffold_13923
Species: Halorubrum lacusprofundi (50%)
2 1477 bp 68.38 11.44 100.13
qh_6_scaffold_13810
Species: Haloarcula amylolytica (50%)
2 1486 bp 69.99 13.06 100.13
qh_6_scaffold_13320
Species: Natronomonas pharaonis (66.67%)
3 1525 bp 69.25 11.93 100.13
qh_6_scaffold_12933
Species: Haloferax mucosum (50%)
2 1558 bp 71.57 22.85 100.13
qh_6_scaffold_6793
Species: Nitratireductor aquibiodomus (50%)
2 2337 bp 62.52 13.78 100.13
Displaying items 451-500 of 17572 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.