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QH_6_UNK

In projects: QH_6  |  diaphorachaeota

Metagenomic Context

METAGENOME

Properties

Avg. coverage: 21.84 Longest contig: 86.52 Kbp Bin length: 43.49 Mbp GC content: 61.40 %
Contigs count: 17572 Features count: 56719 rRNAs count: 11 tRNAs count: 537

Genome completeness

megabin RP 45 / 55 MC: 35 BSCG 42 / 51 MC: 35 ASCG 38 / 38 MC: 38
Displaying items 751-800 of 17572 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
qh_6_scaffold_20000
Species: marine sediment metagenome (100%)
1 1115 bp 41.35 5.83 86.10
qh_6_scaffold_5321
Species: Hymenobacter swuensis (100%)
2 2692 bp 54.16 5.83 101.52
qh_6_scaffold_35686 2 1253 bp 54.03 5.83 99.36
qh_6_scaffold_21974
Species: halophilic archaeon DL31 (100%)
2 1030 bp 54.08 5.83 99.61
qh_6_scaffold_23495 2 1527 bp 54.81 5.83 92.34
qh_6_scaffold_13955
Species: Haloferax mediterranei (50%)
2 1475 bp 50.37 5.83 64.68
qh_6_scaffold_14646 1 1424 bp 50.63 5.83 35.18
qh_6_scaffold_19761 5 3272 bp 53.94 5.84 71.24
qh_6_scaffold_18840 4 2296 bp 53.75 5.84 94.34
qh_6_scaffold_14970
Species: Candidatus Haloredivivus sp. G17 (100%)
1 1403 bp 52.25 5.84 97.29
qh_6_scaffold_13729 11 6009 bp 54.50 5.84 63.11
qh_6_scaffold_17717 3 1231 bp 54.26 5.85 90.17
qh_6_scaffold_22557
Species: BDI (50%)
2 1984 bp 51.46 5.85 34.93
qh_6_scaffold_21236 2 1060 bp 60.57 5.85 64.53
qh_6_scaffold_6490 2 2925 bp 58.15 5.85 100.21
qh_6_scaffold_15283 3 3079 bp 56.64 5.85 94.51
qh_6_scaffold_20852
Species: Salisaeta longa (50%)
2 1077 bp 65.55 5.85 96.66
qh_6_scaffold_22505
Species: Natronomonas pharaonis (50%)
2 1007 bp 69.81 5.86 97.72
qh_6_scaffold_20899 1 1075 bp 54.14 5.86 72.00
qh_6_scaffold_11684 1 2475 bp 49.74 5.86 16.12
qh_6_scaffold_38601 4 1144 bp 67.92 5.86 85.49
qh_6_scaffold_12407
Species: Halalkalicoccus jeotgali (50%)
2 1603 bp 53.77 5.86 59.89
qh_6_scaffold_19409 2 1144 bp 50.17 5.86 100.18
qh_6_scaffold_7428
Species: Thalassiosira pseudonana (50%)
2 2219 bp 60.97 5.86 76.52
qh_6_scaffold_17180
Species: halophilic archaeon J07HX64 (50%)
2 1263 bp 62.87 5.86 92.64
qh_6_scaffold_20943
Species: Natrialba aegyptia (100%)
1 1073 bp 54.43 5.87 97.58
qh_6_scaffold_12479
Species: Halorhabdus tiamatea (50%)
2 2146 bp 39.52 5.87 40.96
qh_6_scaffold_14337 2 1447 bp 53.63 5.87 82.10
qh_6_scaffold_14803 1 1413 bp 46.50 5.87 52.65
qh_6_scaffold_16238 2 2011 bp 58.33 5.87 75.63
qh_6_scaffold_20156 1 1108 bp 40.43 5.87 42.78
qh_6_scaffold_21348
Species: Environmental Halophage eHP-35 (100%)
1 1055 bp 44.36 5.88 99.81
qh_6_scaffold_10531 3 1787 bp 61.78 5.88 66.82
qh_6_scaffold_21831 2 1037 bp 54.77 5.88 91.13
qh_6_scaffold_12868
Order: Haloferacales (66.67%)
3 1564 bp 55.43 5.88 71.93
qh_6_scaffold_10818
Species: Natronorubrum bangense (50%)
6 2943 bp 51.58 5.88 90.52
qh_6_scaffold_16365
Order: Natrialbales (100%)
3 2024 bp 56.08 5.88 64.03
qh_6_scaffold_35498
Species: Lyngbya confervoides (50%)
2 1292 bp 60.91 5.88 48.68
qh_6_scaffold_22617
Species: R_OD1_Kaiserbacteria_54_22 (50%)
2 1003 bp 44.97 5.88 84.65
qh_6_scaffold_22202
Species: GWD2_Desulfuromonadales_61_12_curated (100%)
1 1020 bp 60.20 5.88 71.47
qh_6_scaffold_15607
Species: Haloferax elongans (50%)
2 1359 bp 57.76 5.89 93.60
qh_6_scaffold_10086 3 1835 bp 53.90 5.89 100.22
qh_6_scaffold_38634
Species: Halococcus salifodinae (50%)
2 1240 bp 55.73 5.89 74.76
qh_6_scaffold_13097
Species: GWF2_WS6_complete_39_15 (50%)
2 1544 bp 51.04 5.89 83.55
qh_6_scaffold_21860 1 1036 bp 58.69 5.89 99.90
qh_6_scaffold_19100 3 1951 bp 57.97 5.89 91.18
qh_6_scaffold_19167
Species: Halothece sp. PCC 7418 (50%)
2 1155 bp 41.82 5.89 79.22
qh_6_scaffold_17570
Species: Neospora caninum (100%)
1 1240 bp 49.44 5.89 62.66
qh_6_scaffold_10222 6 1818 bp 63.70 5.89 95.87
qh_6_scaffold_22671
Species: Halogeometricum pallidum (50%)
2 1544 bp 51.30 5.89 76.75
Displaying items 751-800 of 17572 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.