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QH_7_UNK

In projects: QH_7  |  diaphorachaeota

Metagenomic Context

METAGENOME

Properties

Avg. coverage: 25.29 Longest contig: 83.04 Kbp Bin length: 52.16 Mbp GC content: 60.76 %
Contigs count: 21495 Features count: 67681 rRNAs count: 18 tRNAs count: 616

Genome completeness

megabin RP 53 / 55 MC: 42 BSCG 42 / 51 MC: 32 ASCG 38 / 38 MC: 38
Displaying items 20851-20900 of 21495 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
qh_7_scaffold_12879
Species: Halorubrum coriense (100%)
2 1612 bp 60.24 11.17 100.12
qh_7_scaffold_13158
Species: GWC2_OP11_38_9_partial (50%)
2 1588 bp 49.81 10.89 100.13
qh_7_scaffold_7591
Species: Natronomonas moolapensis (100%)
2 4749 bp 67.74 76.75 100.13
qh_7_scaffold_27888
Species: Halosimplex carlsbadense (50%)
2 1582 bp 68.08 25.54 100.13
qh_7_scaffold_13244
Species: Fibrisoma limi (50%)
2 1579 bp 60.86 11.34 100.13
qh_7_scaffold_25228
Species: Halorubrum aidingense (50%)
2 1564 bp 64.64 15.79 100.13
qh_7_scaffold_13502
Species: Natronomonas moolapensis (100%)
2 1561 bp 69.12 38.24 100.13
qh_7_scaffold_13591
Species: Natronomonas pharaonis (50%)
2 1555 bp 68.62 53.38 100.13
qh_7_scaffold_7297
Species: Natronomonas pharaonis (50%)
2 2325 bp 65.42 33.29 100.13
qh_7_scaffold_7300 3 2325 bp 48.26 6.75 100.13
qh_7_scaffold_13658
Species: Cohnella sp. VKM B-2846 (50%)
2 1549 bp 59.65 8.13 100.13
qh_7_scaffold_13779
Species: Natronomonas pharaonis (100%)
2 1540 bp 72.08 57.40 100.13
qh_7_scaffold_13783
Species: Haloarcula sp. CBA1115 (50%)
2 1540 bp 61.36 5.78 100.13
qh_7_scaffold_16592 2 2301 bp 58.28 6.78 100.13
qh_7_scaffold_13840
Species: Salinarchaeum sp. Harcht-Bsk1 (50%)
2 1534 bp 72.29 9.39 100.13
qh_7_scaffold_7525
Species: Halanaeroarchaeum sulfurireducens (50%)
2 2280 bp 66.71 9.69 100.13
qh_7_scaffold_14247
Species: Halococcus hamelinensis (50%)
2 1504 bp 69.95 8.24 100.13
qh_7_scaffold_14291
Species: Salinarchaeum sp. Harcht-Bsk1 (50%)
2 1501 bp 70.89 11.79 100.13
qh_7_scaffold_7693
Species: Halococcus hamelinensis (50%)
2 2247 bp 65.60 22.70 100.13
qh_7_scaffold_14460
Species: Halosimplex carlsbadense (100%)
2 1489 bp 70.92 12.49 100.13
qh_7_scaffold_3604
Species: Halorubrum lacusprofundi (50%)
2 3688 bp 63.61 18.76 100.14
qh_7_scaffold_14869
Species: Haloarcula californiae (50%)
2 1462 bp 68.19 9.30 100.14
qh_7_scaffold_11905
Species: Halosimplex carlsbadense (50%)
2 2193 bp 68.08 23.30 100.14
qh_7_scaffold_8082 2 2181 bp 59.56 10.45 100.14
qh_7_scaffold_15030
Species: Natrialba taiwanensis (50%)
2 1450 bp 68.41 12.41 100.14
qh_7_scaffold_15063
Species: Homo sapiens (50%)
2 1447 bp 44.44 9.81 100.14
qh_7_scaffold_15156
Species: Haloferax elongans (50%)
2 1441 bp 70.78 12.42 100.14
qh_7_scaffold_15202
Species: RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated (50%)
2 1438 bp 63.14 8.55 100.14
qh_7_scaffold_15332
Species: RBG_19FT_COMBO_Chloroflexi_49_13_curated (66.67%)
3 1429 bp 65.99 10.22 100.14
qh_7_scaffold_15693
Species: RLO_Flavobacteria_35_11 (50%)
2 1405 bp 62.14 28.68 100.14
qh_7_scaffold_8560
Species: Halarchaeum acidiphilum (50%)
2 2100 bp 37.19 6.62 100.14
qh_7_scaffold_15986
Species: Halobacterium sp. DL1 (50%)
2 1387 bp 68.93 14.85 100.14
qh_7_scaffold_8758
Species: Halogranum salarium (50%)
2 2073 bp 72.26 35.75 100.15
qh_7_scaffold_16127
Species: Halosimplex carlsbadense (50%)
2 1378 bp 73.58 23.58 100.15
qh_7_scaffold_16239
Species: Halovirus HSTV-1 (50%)
2 1372 bp 65.38 10.06 100.15
qh_7_scaffold_16340
Species: Haloarcula amylolytica (50%)
2 1366 bp 67.13 9.59 100.15
qh_7_scaffold_16379
Species: Haloarcula hispanica (50%)
2 1363 bp 68.82 14.82 100.15
qh_7_scaffold_24901
Species: Halorhabdus utahensis (50%)
2 1360 bp 70.81 22.50 100.15
qh_7_scaffold_16466
Species: Salinibacter ruber (50%)
2 1357 bp 70.74 14.52 100.15
qh_7_scaffold_14908 2 2022 bp 54.30 7.17 100.15
qh_7_scaffold_16623
Species: RBG_16_Euryarchaeota_67_27_curated (50%)
2 1348 bp 75.07 7.72 100.15
qh_7_scaffold_16630
Species: Moorea producens (50%)
2 1348 bp 64.99 6.60 100.15
qh_7_scaffold_32153
Species: Natrialba magadii (50%)
2 1345 bp 73.16 24.15 100.15
qh_7_scaffold_16857
Species: Halalkalicoccus jeotgali (50%)
2 1336 bp 62.57 6.06 100.15
qh_7_scaffold_16955
Species: Haloterrigena salina (50%)
2 1330 bp 66.54 10.30 100.15
qh_7_scaffold_17140
Species: Haloarcula californiae (50%)
2 1321 bp 71.54 13.40 100.15
qh_7_scaffold_32641
Species: Halococcus salifodinae (100%)
2 1315 bp 69.66 26.81 100.15
qh_7_scaffold_17223
Species: BJP_IG2158_Thermoplasmatales_53_16 (50%)
2 1315 bp 66.54 10.11 100.15
qh_7_scaffold_17340
Species: Halosimplex carlsbadense (50%)
2 1309 bp 68.45 10.08 100.15
qh_7_scaffold_17346
Species: Haloarcula hispanica (50%)
2 1309 bp 69.29 6.80 100.15
Displaying items 20851-20900 of 21495 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.