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QH_7_UNK

In projects: QH_7  |  diaphorachaeota

Metagenomic Context

METAGENOME

Properties

Avg. coverage: 25.29 Longest contig: 83.04 Kbp Bin length: 52.16 Mbp GC content: 60.76 %
Contigs count: 21495 Features count: 67681 rRNAs count: 18 tRNAs count: 616

Genome completeness

megabin RP 53 / 55 MC: 42 BSCG 42 / 51 MC: 32 ASCG 38 / 38 MC: 38
Displaying items 20901-20950 of 21495 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
qh_7_scaffold_39817
Species: halophilic archaeon J07HX64 (50%)
2 1303 bp 76.67 13.74 100.15
qh_7_scaffold_17440
Species: uncultured archaeon A07HB70 (100%)
2 1303 bp 64.08 41.98 100.15
qh_7_scaffold_17585
Species: Natronomonas pharaonis (100%)
2 1294 bp 72.80 36.86 100.16
qh_7_scaffold_17771
Species: Halorubrum coriense (50%)
2 1285 bp 67.39 10.43 100.16
qh_7_scaffold_20472
Species: Halosimplex carlsbadense (50%)
4 1914 bp 68.81 17.35 100.16
qh_7_scaffold_9933
Species: Halococcus thailandensis (100%)
2 1908 bp 58.28 15.57 100.16
qh_7_scaffold_10011
Species: Haloferax prahovense (50%)
2 1899 bp 62.09 17.38 100.16
qh_7_scaffold_10052
Species: Natronomonas moolapensis (50%)
2 1896 bp 73.52 56.91 100.16
qh_7_scaffold_25933
Species: halophilic archaeon DL31 (50%)
2 1884 bp 59.77 8.07 100.16
qh_7_scaffold_18392
Species: Halosimplex carlsbadense (50%)
2 1255 bp 61.04 7.01 100.16
qh_7_scaffold_18453
Species: Natronomonas moolapensis (50%)
2 1252 bp 72.44 53.35 100.16
qh_7_scaffold_36063 2 1246 bp 55.62 7.54 100.16
qh_7_scaffold_18790
Species: Halosimplex carlsbadense (50%)
2 1237 bp 76.56 22.88 100.16
qh_7_scaffold_10434
Species: Natronomonas moolapensis (50%)
2 1848 bp 66.77 36.96 100.16
qh_7_scaffold_18889
Species: Halococcus salifodinae (50%)
2 1231 bp 75.47 17.22 100.16
qh_7_scaffold_10530
Species: Halococcus saccharolyticus (100%)
2 1836 bp 69.61 12.75 100.16
qh_7_scaffold_19093
Order: Natrialbales (66.67%)
3 1222 bp 68.99 16.94 100.16
qh_7_scaffold_19149
Species: Haloquadratum walsbyi (50%)
2 1219 bp 73.17 32.81 100.16
qh_7_scaffold_19211
Species: Candidatus Halobonum tyrrellensis (50%)
2 1216 bp 75.41 14.39 100.16
qh_7_scaffold_6859
Species: Natrialba hulunbeirensis (100%)
2 2429 bp 58.09 12.06 100.16
qh_7_scaffold_10908
Species: Natronomonas moolapensis (66.67%)
6 3004 bp 76.80 46.67 100.17
qh_7_scaffold_19527
Species: Haloterrigena turkmenica (50%)
2 1201 bp 64.70 6.99 100.17
qh_7_scaffold_36605
Species: Natronorubrum bangense (50%)
2 1198 bp 73.04 15.11 100.17
qh_7_scaffold_6983
Species: Halosimplex carlsbadense (100%)
2 2396 bp 73.58 44.62 100.17
qh_7_scaffold_19602
Species: Halorubrum californiense (50%)
2 1198 bp 71.79 18.20 100.17
qh_7_scaffold_19840
Order: Halobacteriales (100%)
3 1186 bp 68.47 23.95 100.17
qh_7_scaffold_19841
Species: Natrialba magadii (50%)
2 1186 bp 70.83 5.73 100.17
qh_7_scaffold_20066
Species: Halomicrobium mukohataei (50%)
2 1177 bp 65.59 11.64 100.17
qh_7_scaffold_20067
Species: Natrinema gari (50%)
2 1177 bp 54.89 13.68 100.17
qh_7_scaffold_11441
Species: Natronomonas moolapensis (100%)
2 1740 bp 68.22 10.06 100.17
qh_7_scaffold_20518
Species: Halococcus saccharolyticus (50%)
2 1159 bp 64.62 19.50 100.17
qh_7_scaffold_11503
Species: Candidatus Halobonum tyrrellensis (50%)
2 1734 bp 68.51 9.40 100.17
qh_7_scaffold_20604
Species: Natronomonas moolapensis (50%)
2 1156 bp 75.52 35.47 100.17
qh_7_scaffold_20663
Species: Halostagnicola larsenii (50%)
2 1153 bp 50.13 6.68 100.17
qh_7_scaffold_20744
Species: Halorhabdus utahensis (50%)
2 1150 bp 66.87 31.91 100.17
qh_7_scaffold_20759
Species: Desulfotomaculum acetoxidans (50%)
2 1150 bp 76.00 8.26 100.17
qh_7_scaffold_20761 2 1150 bp 45.65 5.30 100.17
qh_7_scaffold_11582
Order: Halobacteriales (66.67%)
3 1725 bp 69.45 9.51 100.17
qh_7_scaffold_7547
Species: Halosimplex carlsbadense (100%)
2 2276 bp 73.07 11.07 100.18
qh_7_scaffold_44432
Species: Halosimplex carlsbadense (100%)
2 1129 bp 69.80 13.37 100.18
qh_7_scaffold_21343
Species: Halococcus hamelinensis (50%)
2 1126 bp 71.76 15.63 100.18
qh_7_scaffold_2095 4 7307 bp 56.55 10.37 100.18
qh_7_scaffold_21570
Species: Halorubrum lacusprofundi (50%)
2 1117 bp 53.63 5.55 100.18
qh_7_scaffold_21815 2 1108 bp 46.39 5.69 100.18
qh_7_scaffold_21879
Species: Halorubrum saccharovorum (50%)
2 1105 bp 67.96 17.92 100.18
qh_7_scaffold_26060
Species: Halococcus hamelinensis (50%)
2 1644 bp 71.11 59.06 100.18
qh_7_scaffold_12489
Species: Halosimplex carlsbadense (60%)
5 1644 bp 59.67 14.54 100.18
qh_7_scaffold_22107
Species: Halococcus thailandensis (50%)
2 1096 bp 64.14 11.04 100.18
qh_7_scaffold_22121
Species: Haloterrigena limicola (50%)
2 1096 bp 63.87 7.66 100.18
qh_7_scaffold_12638
Species: Halovivax ruber (50%)
2 1632 bp 70.04 37.56 100.18
Displaying items 20901-20950 of 21495 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.