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QH_7_UNK

In projects: QH_7  |  diaphorachaeota

Metagenomic Context

METAGENOME

Properties

Avg. coverage: 25.29 Longest contig: 83.04 Kbp Bin length: 52.16 Mbp GC content: 60.76 %
Contigs count: 21495 Features count: 67681 rRNAs count: 18 tRNAs count: 616

Genome completeness

megabin RP 53 / 55 MC: 42 BSCG 42 / 51 MC: 32 ASCG 38 / 38 MC: 38
Displaying items 451-500 of 21495 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
qh_7_scaffold_11971
Species: Natronococcus jeotgali (66.67%)
3 2301 bp 49.37 4.87 96.48
qh_7_scaffold_22328
Species: uncultured archaeon (100%)
1 1089 bp 47.38 4.87 99.72
qh_7_scaffold_18019 2 1274 bp 46.62 4.87 61.22
qh_7_scaffold_20229
Species: Haloarcula sinaiiensis (50%)
2 1171 bp 59.01 4.87 90.69
qh_7_scaffold_17185 3 1905 bp 42.36 4.88 59.21
qh_7_scaffold_6303 6 2563 bp 38.78 4.88 77.37
qh_7_scaffold_20253 2 2151 bp 50.81 4.88 102.51
qh_7_scaffold_18083
Species: Haloarcula hispanica (50%)
2 1270 bp 57.32 4.88 94.49
qh_7_scaffold_24139 2 1025 bp 34.05 4.88 41.85
qh_7_scaffold_24147 3 1025 bp 47.41 4.88 57.66
qh_7_scaffold_19804 2 1189 bp 45.42 4.88 99.41
qh_7_scaffold_20835
Species: RBG_13_Actinobacteria_63_9_curated (50%)
2 1147 bp 55.54 4.88 37.14
qh_7_scaffold_18460 3 1251 bp 43.41 4.88 73.62
qh_7_scaffold_19394 3 1208 bp 59.19 4.88 67.80
qh_7_scaffold_15281
Domain: Archaea (66.67%)
3 1433 bp 40.13 4.88 74.53
qh_7_scaffold_12521 1 1641 bp 49.06 4.88 99.82
qh_7_scaffold_24884
Species: Halococcus thailandensis (100%)
1 1002 bp 45.71 4.89 50.00
qh_7_scaffold_23025
Species: Halorhabdus utahensis (50%)
2 1064 bp 57.52 4.89 100.38
qh_7_scaffold_14108
Species: Halostagnicola larsenii (50%)
2 1514 bp 52.58 4.89 53.50
qh_7_scaffold_21907
Species: Natrinema altunense (100%)
1 1104 bp 50.18 4.89 57.07
qh_7_scaffold_21435 2 1122 bp 46.52 4.90 87.97
qh_7_scaffold_17392 3 1306 bp 43.11 4.90 90.05
qh_7_scaffold_24911
Species: Natronobacterium gregoryi (50%)
2 1001 bp 48.55 4.90 54.85
qh_7_scaffold_17040
Species: Joostella marina (100%)
1 1326 bp 50.98 4.90 68.78
qh_7_scaffold_23060 2 1062 bp 60.26 4.90 34.75
qh_7_scaffold_22499
Species: RLO_Rokubacteria_71_22 (50%)
2 1082 bp 62.38 4.90 99.82
qh_7_scaffold_15640
Species: Manacus vitellinus (100%)
1 1408 bp 32.32 4.90 99.93
qh_7_scaffold_24272 2 1020 bp 64.31 4.90 86.76
qh_7_scaffold_26348 3 1756 bp 45.79 4.90 64.07
qh_7_scaffold_13906 1 1530 bp 50.59 4.90 99.80
qh_7_scaffold_19024
Species: Halovirus HGTV-1 (50%)
2 1225 bp 45.31 4.90 84.24
qh_7_scaffold_15319
Class: Gammaproteobacteria (66.67%)
3 1430 bp 67.13 4.90 91.47
qh_7_scaffold_20470 3 1161 bp 43.58 4.91 56.07
qh_7_scaffold_6531 3 2507 bp 55.72 4.91 99.92
qh_7_scaffold_20481
Species: Fictibacillus macauensis (50%)
2 1161 bp 54.26 4.91 93.80
qh_7_scaffold_19530
Species: Hydrogenivirga sp. 128-5-R1-1 (100%)
1 1201 bp 53.62 4.91 99.67
qh_7_scaffold_19531
Species: Hyalangium minutum (100%)
1 1201 bp 52.87 4.91 99.92
qh_7_scaffold_19545 2 1201 bp 54.70 4.91 69.44
qh_7_scaffold_23697
Species: uncultured archaeon A07HN63 (50%)
2 1039 bp 44.37 4.91 81.71
qh_7_scaffold_17422
Species: Halobacterium sp. DL1 (100%)
1 1304 bp 46.47 4.91 97.78
qh_7_scaffold_11022
Phylum: Proteobacteria (100%)
3 3115 bp 47.03 4.91 76.95
qh_7_scaffold_29772
Species: Chryseobacterium antarcticum (100%)
1 1404 bp 48.86 4.91 63.25
qh_7_scaffold_24297 1 1019 bp 37.59 4.91 63.89
qh_7_scaffold_24310 7 3114 bp 42.13 4.91 63.20
qh_7_scaffold_20454
Species: Robiginitalea biformata (100%)
1 1162 bp 40.53 4.91 99.66
qh_7_scaffold_23178 3 1058 bp 58.32 4.91 86.77
qh_7_scaffold_22174 3 2112 bp 52.56 4.92 73.15
qh_7_scaffold_8614 1 2092 bp 40.20 4.92 99.95
qh_7_scaffold_24374 1 1017 bp 54.47 4.92 99.71
qh_7_scaffold_13989 3 1523 bp 54.04 4.92 59.68
Displaying items 451-500 of 21495 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.