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QH_7_UNK

In projects: QH_7  |  diaphorachaeota

Metagenomic Context

METAGENOME

Properties

Avg. coverage: 25.29 Longest contig: 83.04 Kbp Bin length: 52.16 Mbp GC content: 60.76 %
Contigs count: 21495 Features count: 67681 rRNAs count: 18 tRNAs count: 616

Genome completeness

megabin RP 53 / 55 MC: 42 BSCG 42 / 51 MC: 32 ASCG 38 / 38 MC: 38
Displaying items 401-450 of 21495 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
qh_7_scaffold_22522
Species: Cellulomonas carbonis (50%)
2 1081 bp 65.96 4.81 91.03
qh_7_scaffold_22549
Species: Halanaeroarchaeum sulfurireducens (50%)
2 1080 bp 55.00 4.81 85.28
qh_7_scaffold_36148 3 1373 bp 49.45 4.81 72.10
qh_7_scaffold_14345 2 1498 bp 57.08 4.81 58.08
qh_7_scaffold_24320
Species: Verminephrobacter eiseniae (100%)
1 1019 bp 44.95 4.81 88.03
qh_7_scaffold_16944
Species: Haloferax sp. Arc-Hr (100%)
2 1331 bp 54.09 4.81 96.92
qh_7_scaffold_14407
Domain: Archaea (66.67%)
3 1493 bp 41.93 4.82 96.85
qh_7_scaffold_20477 1 1161 bp 38.59 4.82 80.62
qh_7_scaffold_12807 3 1618 bp 50.00 4.82 94.75
qh_7_scaffold_23215 2 1869 bp 41.57 4.82 34.51
qh_7_scaffold_18628
Species: Haladaptatus paucihalophilus (100%)
1 1244 bp 41.96 4.82 68.73
qh_7_scaffold_18184
Species: Algoriphagus machipongonensis (100%)
1 1265 bp 56.05 4.82 99.84
qh_7_scaffold_12110
Species: uncultured archaeon A07HN63 (100%)
1 1678 bp 51.07 4.83 96.36
qh_7_scaffold_24437 2 1015 bp 49.06 4.83 72.12
qh_7_scaffold_18636 2 1243 bp 51.17 4.83 54.55
qh_7_scaffold_21048
Species: Gracilibacillus halophilus (100%)
1 1138 bp 52.28 4.83 75.66
qh_7_scaffold_17074 3 1324 bp 50.60 4.83 57.78
qh_7_scaffold_22082 2 1097 bp 54.69 4.83 90.25
qh_7_scaffold_14189
Species: GWC2_TM7_48_9 (100%)
1 1508 bp 52.06 4.84 95.29
qh_7_scaffold_20037
Species: GWA2_OP11_38_24 (50%)
2 1178 bp 49.32 4.84 96.26
qh_7_scaffold_13120 1 1590 bp 41.57 4.84 99.81
qh_7_scaffold_23297 4 1054 bp 38.80 4.84 95.35
qh_7_scaffold_13648
Class: Halobacteria (100%)
3 1550 bp 53.87 4.84 90.58
qh_7_scaffold_22128 2 1096 bp 47.72 4.84 78.56
qh_7_scaffold_15702
Species: GWF2_OD1_42_19 (50%)
2 1404 bp 51.64 4.84 86.11
qh_7_scaffold_18809 2 1236 bp 55.26 4.85 38.59
qh_7_scaffold_9238 2 2002 bp 48.15 4.85 41.66
qh_7_scaffold_23973 2 1030 bp 43.50 4.85 100.19
qh_7_scaffold_17499
Species: Halorhabdus utahensis (100%)
1 1300 bp 55.54 4.85 83.77
qh_7_scaffold_16416 5 1361 bp 42.54 4.85 96.33
qh_7_scaffold_18765
Species: Methanococcus aeolicus (50%)
2 1238 bp 47.98 4.85 75.61
qh_7_scaffold_19225
Species: Halonotius sp. J07HN6 (50%)
2 1216 bp 37.83 4.85 86.10
qh_7_scaffold_19292 7 1213 bp 59.19 4.86 88.29
qh_7_scaffold_18844 3 1234 bp 40.36 4.86 70.26
qh_7_scaffold_15171 2 1440 bp 46.67 4.86 62.50
qh_7_scaffold_22810
Species: Verminephrobacter eiseniae (50%)
2 1071 bp 61.34 4.86 87.68
qh_7_scaffold_14296 3 1501 bp 56.10 4.86 98.73
qh_7_scaffold_11780
Species: Ectocarpus siliculosus (50%)
2 1708 bp 53.10 4.86 83.61
qh_7_scaffold_17995 2 1275 bp 50.75 4.86 52.47
qh_7_scaffold_20182 3 1172 bp 40.27 4.86 100.34
qh_7_scaffold_16447
Domain: Viruses (50%)
4 1359 bp 43.78 4.86 99.12
qh_7_scaffold_20679 3 1153 bp 65.05 4.86 82.48
qh_7_scaffold_16499 3 1356 bp 41.30 4.87 74.12
qh_7_scaffold_19776
Species: Perkinsus marinus (50%)
2 1190 bp 55.29 4.87 95.80
qh_7_scaffold_21248 1 1130 bp 40.62 4.87 95.84
qh_7_scaffold_13776
Species: Haloarcula marismortui (50%)
2 1540 bp 44.35 4.87 89.42
qh_7_scaffold_14010
Species: R_Chlamydiae_45_22 (50%)
2 1521 bp 60.22 4.87 93.89
qh_7_scaffold_18427
Class: Halobacteria (66.67%)
3 1253 bp 53.23 4.87 90.98
qh_7_scaffold_21273 2 1129 bp 62.00 4.87 93.00
qh_7_scaffold_21275 3 1129 bp 54.03 4.87 47.56
Displaying items 401-450 of 21495 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.