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qh_8_scaffold_2560

Search features with annotation key words

Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qh_8_scaffold_2560_1
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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2..163
DNA (162bp) protein (54aa)
DNA repair protein radA {ECO:0000256|RuleBase:RU003555}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter ru
qh_8_scaffold_2560_2
Chlorobium chlorochromatii, Chlorobium, Chlorobiales, Chlorobia, Chlorobi, Bacteria

Not on your lists

comp(320..559)
DNA (240bp) protein (80aa)
CopG family transcriptional regulator n=1 Tax=Salisaeta longa RepID=UPI0003B359B6
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABB27818.1}; TaxID=340177 species="Bacteria; Chlorobi; Chlorobia; Chlorobiales; Chlorobiaceae; Chlorobium/Pelodictyon group; Chlorobium.;" source="Chlorobium
qh_8_scaffold_2560_3
CG_Cyano_02, Cyanobacteria, Bacteria

Not on your lists

comp(556..984)
DNA (429bp) protein (143aa)
hypothetical protein n=1 Tax=Salisaeta longa RepID=UPI0003B5DCB4
hypothetical protein Tax=CG_Cyano_02
hypothetical protein
qh_8_scaffold_2560_4
Thioflavicoccus mobilis, Thioflavicoccus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1169..1750)
DNA (582bp) protein (194aa)
Uncharacterized protein n=1 Tax=Thioflavicoccus mobilis 8321 RepID=L0GV66_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGA89260.1}; TaxID=765912 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Thioflavicoccus.;" source="Thioflavicoccus mobi
qh_8_scaffold_2560_5
Salisaeta longa, Salisaeta, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(1764..2384)
DNA (621bp) protein (207aa)
hypothetical protein n=1 Tax=Salisaeta longa RepID=UPI0003B70367
qh_8_scaffold_2560_6
Zunongwangia profunda, Zunongwangia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

2896..3390
DNA (495bp) protein (165aa)
hypothetical protein n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C540A
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADF53660.1}; TaxID=655815 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Zunongwangia.;" source="Zunongwangia profunda
qh_8_scaffold_2560_7
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

3700..4356
DNA (657bp) protein (219aa)
hypothetical protein n=1 Tax=Salisaeta longa RepID=UPI0003B73D92
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABC44438.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
qh_8_scaffold_2560_8
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

4477..5724
DNA (1248bp) protein (416aa)
N-acetylmuramoyl-L-alanine amidase {ECO:0000313|EMBL:ACY47709.1}; EC=3.5.1.28 {ECO:0000313|EMBL:ACY47709.1};; Flags: Precursor;; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Order II.
cell wall hydrolase n=1 Tax=Salisaeta longa RepID=UPI0003B46EC2
N-acetylmuramoyl-L-alanine amidase
qh_8_scaffold_2560_9
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(5752..6144)
DNA (393bp) protein (131aa)
Endoribonuclease L-PSP n=2 Tax=Rhodothermus marinus RepID=D0MGF6_RHOM4
endoribonuclease L-PSP
Endoribonuclease L-PSP {ECO:0000313|EMBL:ACY47712.1}; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source="Rhodothermus marin
qh_8_scaffold_2560_10

Not on your lists

comp(6296..6910)
DNA (615bp) protein (205aa)
hypothetical protein n=1 Tax=Balneola vulgaris RepID=UPI0003650281
Bifunctional chorismate mutase/prephenate dehydrogenase {ECO:0000313|EMBL:EQD69007.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metage
tyrA; chorismate mutase/prephenate dehydrogenase
qh_8_scaffold_2560_11

Not on your lists

comp(6895..7326)
DNA (432bp) protein (144aa)
tyrA; bifunctional chorismate mutase/prephenate dehydrogenase (EC:1.3.1.12 5.4.99.5)
hypothetical protein n=1 Tax=Balneola vulgaris RepID=UPI0003650281
Bifunctional chorismate mutase/prephenate dehydrogenase {ECO:0000313|EMBL:EQD69007.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metage
qh_8_scaffold_2560_12
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

7468..8799
DNA (1332bp) protein (444aa)
tRNA-specific 2-thiouridylase MnmA {ECO:0000256|HAMAP-Rule:MF_00144}; EC=2.8.1.- {ECO:0000256|HAMAP-Rule:MF_00144};; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sed
thiouridylase n=1 Tax=Salisaeta longa RepID=UPI0003B58F4F
trmU; tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase 1
qh_8_scaffold_2560_13
unknown

Not on your lists

8919..9224
DNA (306bp) protein (102aa)

This feature has no annotations

qh_8_scaffold_2560_14
Methanoculleus bourgensis, Methanoculleus, Methanomicrobiales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

9259..9633
DNA (375bp) protein (125aa)
Uncharacterized protein n=1 Tax=Methanoculleus bourgensis (strain ATCC 43281 / DSM 3045 / OCM 15 / MS2) RepID=I7LNY7_METBM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCJ37504.1}; TaxID=1201294 species="Archaea; Euryarchaeota; Methanomicrobia; Methanomicrobiales; Methanomicrobiaceae; Methanoculleus.;" source="Methanoculleus
qh_8_scaffold_2560_15
RBG_16_Chloroflexi_50_9_curated, Chloroflexi, Bacteria

Not on your lists

9821..11413
DNA (1593bp) protein (531aa)
hypothetical protein; K14415 tRNA-splicing ligase RtcB [EC:6.5.1.3] Tax=RBG_16_Chloroflexi_50_9_curated
RNA-splicing ligase RtcB n=1 Tax=Dehalococcoides sp. (strain BAV1) RepID=A5FR49_DEHSB
hypothetical protein
qh_8_scaffold_2560_16
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(11555..11929)
DNA (375bp) protein (125aa)
Prolipoprotein diacylglyceryl transferase n=2 Tax=Rhodothermus marinus RepID=D0MJ46_RHOM4
prolipoprotein diacylglyceryl transferase
Prolipoprotein diacylglyceryl transferase {ECO:0000313|EMBL:ACY48504.1}; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source=
Displaying 16 items

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