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QH_8_UNK

In projects: QH_8  |  diaphorachaeota

Metagenomic Context

METAGENOME

Properties

Avg. coverage: 24.80 Longest contig: 129.40 Kbp Bin length: 65.07 Mbp GC content: 61.69 %
Contigs count: 26699 Features count: 85647 rRNAs count: 16 tRNAs count: 794

Genome completeness

megabin RP 52 / 55 MC: 46 BSCG 46 / 51 MC: 44 ASCG 38 / 38 MC: 38
Displaying items 26301-26350 of 26699 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
qh_8_scaffold_25269
Species: Natronorubrum bangense (50%)
2 1204 bp 67.94 42.28 100.42
qh_8_scaffold_13487 3 1909 bp 64.06 13.72 100.42
qh_8_scaffold_30610
Species: Halosimplex carlsbadense (50%)
2 1664 bp 70.07 44.53 100.42
qh_8_scaffold_33090
Species: Natrinema sp. J7-2 (100%)
2 1425 bp 61.12 18.04 100.42
qh_8_scaffold_6387
Order: Methanosarcinales (50%)
4 3077 bp 62.17 15.21 100.42
qh_8_scaffold_36092
Class: Halobacteria (66.67%)
3 1419 bp 69.63 23.96 100.42
qh_8_scaffold_13772 3 1882 bp 65.36 9.88 100.43
qh_8_scaffold_5665
Order: Halobacteriales (66.67%)
3 3289 bp 68.35 17.60 100.43
qh_8_scaffold_24577
Domain: Archaea (66.67%)
3 1873 bp 77.63 56.30 100.43
qh_8_scaffold_47740
Species: Natronomonas moolapensis (100%)
3 1165 bp 67.98 66.87 100.43
qh_8_scaffold_11821
Species: Haloferax elongans (50%)
2 2088 bp 59.15 14.85 100.43
qh_8_scaffold_7915
Species: Natronomonas pharaonis (66.67%)
3 2700 bp 70.44 43.70 100.44
qh_8_scaffold_27375
Order: Halobacteriales (66.67%)
3 2022 bp 62.36 8.90 100.45
qh_8_scaffold_17924
Class: Halobacteria (66.67%)
3 1562 bp 66.39 9.09 100.45
qh_8_scaffold_28239 4 1099 bp 61.42 5.10 100.46
qh_8_scaffold_22789
Species: Natronomonas moolapensis (100%)
2 1305 bp 73.56 20.31 100.46
qh_8_scaffold_40939
Order: Halobacteriales (75%)
4 1087 bp 63.02 13.43 100.46
qh_8_scaffold_22898
Species: Natronomonas pharaonis (100%)
2 1299 bp 72.98 13.16 100.46
qh_8_scaffold_15557
Species: Haladaptatus paucihalophilus (50%)
2 1732 bp 69.28 19.34 100.46
qh_8_scaffold_22980
Genus: Haloarcula (66.67%)
3 1296 bp 67.59 17.52 100.46
qh_8_scaffold_28851
Species: Haloferax gibbonsii (50%)
2 1078 bp 73.47 10.02 100.46
qh_8_scaffold_28969 2 1075 bp 50.70 6.23 100.47
qh_8_scaffold_23254 4 1284 bp 55.69 7.40 100.47
qh_8_scaffold_23496
Species: Halobacterium sp. DL1 (50%)
2 1275 bp 52.00 5.96 100.47
qh_8_scaffold_10870 3 2971 bp 69.37 39.38 100.47
qh_8_scaffold_29620 3 1057 bp 67.08 9.74 100.47
qh_8_scaffold_23698 4 1266 bp 72.20 9.32 100.47
qh_8_scaffold_19496
Species: Candidatus Halobonum tyrrellensis (100%)
3 1472 bp 72.55 13.18 100.48
qh_8_scaffold_24418
Species: Natronomonas moolapensis (50%)
2 1236 bp 73.71 50.32 100.49
qh_8_scaffold_20107
Species: Natronomonas pharaonis (50%)
2 1439 bp 70.33 52.47 100.49
qh_8_scaffold_24478 4 1233 bp 60.58 6.89 100.49
qh_8_scaffold_23337
Class: Halobacteria (60%)
5 2054 bp 66.85 10.08 100.49
qh_8_scaffold_14151
Species: Salisaeta icosahedral phage 1 (66.67%)
3 1848 bp 61.36 10.06 100.49
qh_8_scaffold_24611
Species: Halococcus hamelinensis (50%)
2 1227 bp 56.48 5.38 100.49
qh_8_scaffold_20296
Domain: Bacteria (75%)
4 1430 bp 60.21 52.52 100.49
qh_8_scaffold_24963
Species: Halosimplex carlsbadense (66.67%)
3 1215 bp 66.50 33.91 100.49
qh_8_scaffold_20598
Class: Halobacteria (100%)
3 1415 bp 67.77 9.40 100.50
qh_8_scaffold_31567
Species: Halogeometricum borinquense (50%)
2 1003 bp 71.39 18.25 100.50
qh_8_scaffold_20912
Genus: Natronomonas (66.67%)
3 1397 bp 69.01 34.72 100.50
qh_8_scaffold_25453
Order: Halobacteriales (66.67%)
3 1197 bp 65.08 11.28 100.50
qh_8_scaffold_25669
Genus: Halococcus (66.67%)
3 1188 bp 66.75 9.43 100.51
qh_8_scaffold_25670
Species: Natronomonas moolapensis (50%)
2 1188 bp 70.20 42.09 100.51
qh_8_scaffold_17679
Species: Halalkalicoccus jeotgali (50%)
2 1579 bp 71.88 50.66 100.51
qh_8_scaffold_25917
Species: Natrinema sp. J7-2 (50%)
2 1179 bp 60.64 8.06 100.51
qh_8_scaffold_32538
Species: Natronomonas moolapensis (50%)
2 1370 bp 71.17 29.42 100.51
qh_8_scaffold_26335
Species: Halonotius sp. J07HN4 (50%)
2 1164 bp 68.21 11.51 100.52
qh_8_scaffold_8808
Species: Halococcus saccharolyticus (50%)
2 2519 bp 67.33 69.95 100.52
qh_8_scaffold_1458
Species: Haloquadratum walsbyi (80%)
5 6975 bp 51.76 17.39 100.52
qh_8_scaffold_13198
Species: Natronomonas moolapensis (66.67%)
3 1937 bp 74.75 16.73 100.52
qh_8_scaffold_21935
Species: Haloferax denitrificans (50%)
2 1346 bp 68.50 12.41 100.52
Displaying items 26301-26350 of 26699 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.