ggKbase home page
Advanced Search
Search Help

QH_8_UNK

In projects: QH_8  |  diaphorachaeota

Metagenomic Context

METAGENOME

Properties

Avg. coverage: 24.80 Longest contig: 129.40 Kbp Bin length: 65.07 Mbp GC content: 61.69 %
Contigs count: 26699 Features count: 85647 rRNAs count: 16 tRNAs count: 794

Genome completeness

megabin RP 52 / 55 MC: 46 BSCG 46 / 51 MC: 44 ASCG 38 / 38 MC: 38
Displaying items 26351-26400 of 26699 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
qh_8_scaffold_18387
Species: BJP_08E140C01_Bacteriodales_41_10 (50%)
2 1534 bp 56.91 8.28 100.52
qh_8_scaffold_8097
Species: Haloarcula amylolytica (66.67%)
3 2665 bp 52.12 9.31 100.52
qh_8_scaffold_27081
Species: Halococcus saccharolyticus (50%)
2 1140 bp 61.58 6.75 100.53
qh_8_scaffold_27256
Species: Haloquadratum walsbyi (100%)
2 1134 bp 51.06 11.11 100.53
qh_8_scaffold_27427 3 1128 bp 65.87 8.07 100.53
qh_8_scaffold_7432
Domain: Bacteria (50%)
4 2796 bp 40.34 4.65 100.54
qh_8_scaffold_16314
Order: Halobacteriales (60%)
5 1674 bp 70.91 111.11 100.54
qh_8_scaffold_25043
Order: Halobacteriales (50%)
4 1850 bp 68.22 74.76 100.54
qh_8_scaffold_27996
Species: Halococcus salifodinae (50%)
2 1107 bp 70.10 16.17 100.54
qh_8_scaffold_32298
Species: Haloterrigena turkmenica (50%)
2 1650 bp 69.52 11.94 100.55
qh_8_scaffold_23353
Species: Natronomonas pharaonis (100%)
3 1280 bp 70.94 41.41 100.55
qh_8_scaffold_1546 6 6764 bp 49.04 18.26 100.55
qh_8_scaffold_19744
Genus: Halococcus (66.67%)
3 1459 bp 74.23 20.90 100.55
qh_8_scaffold_14441
Species: GWF2_Bacteroidetes_35_48_curated (50%)
2 1820 bp 55.71 6.70 100.55
qh_8_scaffold_16882
Species: Halococcus salifodinae (50%)
2 1635 bp 66.85 9.42 100.55
qh_8_scaffold_23647
Species: GWF2_Bacteroidetes_41_31_curated (50%)
2 1268 bp 62.62 5.76 100.55
qh_8_scaffold_28703
Species: Salinibacter ruber (100%)
2 1083 bp 72.02 20.41 100.55
qh_8_scaffold_28778
Species: Halosimplex carlsbadense (50%)
2 1080 bp 71.48 16.94 100.56
qh_8_scaffold_12946
Order: Halobacteriales (75%)
4 1963 bp 72.49 46.56 100.56
qh_8_scaffold_20374 3 1426 bp 34.99 5.12 100.56
qh_8_scaffold_20430
Species: Salinarchaeum sp. Harcht-Bsk1 (50%)
4 1423 bp 68.24 14.69 100.56
qh_8_scaffold_17559
Order: Halobacteriales (66.67%)
3 1587 bp 69.57 54.13 100.57
qh_8_scaffold_24726
Species: halophilic archaeon DL31 (100%)
3 1223 bp 65.25 8.18 100.57
qh_8_scaffold_13365
Species: Halosimplex carlsbadense (100%)
2 1921 bp 69.60 35.19 100.57
qh_8_scaffold_16417
Species: Halosimplex carlsbadense (50%)
6 2261 bp 67.93 53.71 100.57
qh_8_scaffold_21229
Order: Halobacteriales (66.67%)
3 1381 bp 70.67 22.59 100.58
qh_8_scaffold_13633
Species: Natronomonas moolapensis (60%)
5 1894 bp 68.00 58.66 100.58
qh_8_scaffold_12423
Species: RLO_Rokubacteria_71_22 (66.67%)
3 2869 bp 58.35 6.76 100.59
qh_8_scaffold_31390
Species: Natronomonas pharaonis (66.67%)
3 1008 bp 73.61 61.01 100.59
qh_8_scaffold_9870
Order: Halobacteriales (66.67%)
3 2344 bp 66.25 11.05 100.60
qh_8_scaffold_22179
Species: Halogeometricum borinquense (50%)
2 1333 bp 59.34 10.13 100.60
qh_8_scaffold_6151 8 3146 bp 64.30 9.41 100.60
qh_8_scaffold_12729
Phylum: Bacteroidetes (66.67%)
3 1983 bp 66.62 11.65 100.61
qh_8_scaffold_19252
Species: Halorubrum saccharovorum (50%)
2 1485 bp 45.32 5.45 100.61
qh_8_scaffold_22479
Species: halophilic archaeon J07HB67 (50%)
2 1318 bp 74.58 69.42 100.61
qh_8_scaffold_42371
Species: Halorubrum kocurii (66.67%)
3 1288 bp 66.30 73.37 100.62
qh_8_scaffold_27719
Species: Natrinema pellirubrum (50%)
2 1118 bp 61.45 68.16 100.63
qh_8_scaffold_23664
Species: Halosimplex carlsbadense (100%)
2 1267 bp 68.90 36.62 100.63
qh_8_scaffold_13579
Species: Natronomonas moolapensis (100%)
3 1899 bp 75.30 47.81 100.63
qh_8_scaffold_9825
Order: Halobacteriales (66.67%)
3 2352 bp 60.63 8.42 100.64
qh_8_scaffold_28298
Species: Halorubrum hochstenium (50%)
2 1097 bp 72.56 16.50 100.64
qh_8_scaffold_20738
Species: Natrinema versiforme (50%)
2 1407 bp 67.66 14.14 100.64
qh_8_scaffold_29164
Species: Halosimplex carlsbadense (50%)
2 1070 bp 68.97 20.00 100.65
qh_8_scaffold_24744
Species: Halococcus hamelinensis (50%)
2 1222 bp 65.22 22.67 100.66
qh_8_scaffold_25007 4 1213 bp 42.21 9.15 100.66
qh_8_scaffold_25075
Domain: Bacteria (66.67%)
3 1210 bp 50.50 6.53 100.66
qh_8_scaffold_21712
Species: halophilic archaeon DL31 (100%)
2 1356 bp 69.62 9.81 100.66
qh_8_scaffold_51662
Class: Halobacteria (66.67%)
3 1347 bp 76.47 67.26 100.67
qh_8_scaffold_16737
Order: Haloferacales (66.67%)
3 1645 bp 65.84 8.69 100.67
qh_8_scaffold_19218
Order: Halobacteriales (66.67%)
3 1487 bp 66.24 13.18 100.67
Displaying items 26351-26400 of 26699 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.