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QH_9_UNK

In projects: QH_9  |  diaphorachaeota

Metagenomic Context

METAGENOME

Properties

Avg. coverage: 22.86 Longest contig: 67.25 Kbp Bin length: 50.11 Mbp GC content: 61.51 %
Contigs count: 22383 Features count: 65940 rRNAs count: 15 tRNAs count: 0

Genome completeness

megabin RP 51 / 55 MC: 48 BSCG 44 / 51 MC: 40 ASCG 38 / 38 MC: 38
Displaying items 21751-21800 of 22383 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
qh_9_scaffold_20481
Species: BJP_S1_SUB10_Syntrophobacterales_50_21 (100%)
1 1200 bp 38.17 4.92 99.75
qh_9_scaffold_20508
Species: Aphanomyces astaci (100%)
1 1199 bp 56.05 4.92 99.83
qh_9_scaffold_10438 1 1848 bp 56.33 4.92 11.04
qh_9_scaffold_14120 3 2790 bp 49.25 4.91 38.06
qh_9_scaffold_25070 1 1038 bp 59.06 4.91 99.71
qh_9_scaffold_25073
Species: Natronolimnobius innermongolicus (50%)
2 1038 bp 49.71 4.91 81.50
qh_9_scaffold_22035 2 1141 bp 51.18 4.91 90.45
qh_9_scaffold_9352 2 1975 bp 53.52 4.91 97.06
qh_9_scaffold_17282
Species: Branchiostoma floridae (50%)
2 1343 bp 57.41 4.91 85.11
qh_9_scaffold_23783
Species: Clostridiales bacterium oral taxon 876 (50%)
2 1079 bp 44.58 4.91 70.62
qh_9_scaffold_25665
Species: Pedobacter heparinus (100%)
1 1020 bp 60.39 4.90 99.71
qh_9_scaffold_19885 3 1224 bp 58.50 4.90 100.49
qh_9_scaffold_17180
Species: Thermotoga maritima (100%)
1 1348 bp 46.66 4.90 99.93
qh_9_scaffold_23150 1 1101 bp 60.04 4.90 41.69
qh_9_scaffold_8475
Order: Natrialbales (66.67%)
3 2737 bp 48.12 4.90 89.44
qh_9_scaffold_23630
Species: RIFCSPLOWO2_12_FULL_Bacteroidetes_37_12_curated (50%)
2 1084 bp 45.30 4.89 86.90
qh_9_scaffold_33129
Species: Chlorobium phaeovibrioides (100%)
1 1698 bp 55.18 4.89 25.62
qh_9_scaffold_24863 3 1044 bp 47.99 4.89 95.98
qh_9_scaffold_14440 1 1512 bp 35.71 4.89 100.00
qh_9_scaffold_46317
Species: Ruminococcus sp. CAG:17 (50%)
2 1145 bp 36.16 4.89 66.81
qh_9_scaffold_18833 1 1268 bp 58.68 4.89 96.06
qh_9_scaffold_19778 4 1228 bp 48.62 4.89 85.75
qh_9_scaffold_19318
Species: Gemmatimonadetes bacterium KBS708 (100%)
1 1247 bp 51.72 4.89 99.84
qh_9_scaffold_25564 2 1023 bp 40.76 4.89 41.06
qh_9_scaffold_24923
Domain: Archaea (66.67%)
3 1042 bp 43.09 4.89 86.66
qh_9_scaffold_24221
Species: Halorubrum arcis (100%)
1 1064 bp 51.69 4.89 99.81
qh_9_scaffold_18754 2 2478 bp 53.03 4.88 76.88
qh_9_scaffold_24821
Species: Halococcus salifodinae (100%)
1 1046 bp 41.40 4.88 99.81
qh_9_scaffold_25494 1 1025 bp 54.24 4.88 99.80
qh_9_scaffold_18805 1 1270 bp 42.52 4.88 99.92
qh_9_scaffold_8161 1 2151 bp 51.79 4.88 37.38
qh_9_scaffold_25559
Species: Haloarcula japonica (50%)
2 1024 bp 54.59 4.88 77.93
qh_9_scaffold_20244 2 1209 bp 55.67 4.88 45.16
qh_9_scaffold_17031 3 2009 bp 58.49 4.88 52.41
qh_9_scaffold_28150 2 2256 bp 52.88 4.88 39.89
qh_9_scaffold_43480
Species: Siccibacter turicensis (50%)
2 1167 bp 55.10 4.88 86.38
qh_9_scaffold_6654 7 2423 bp 36.24 4.87 73.92
qh_9_scaffold_17861
Species: R_PER_ii_51_15 (50%)
2 1315 bp 41.37 4.87 71.18
qh_9_scaffold_10066 3 1890 bp 50.58 4.87 76.35
qh_9_scaffold_7273 3 2298 bp 50.61 4.87 61.10
qh_9_scaffold_15247 3 1458 bp 42.94 4.87 60.08
qh_9_scaffold_10410 6 3288 bp 56.48 4.87 92.52
qh_9_scaffold_22354
Species: marine sediment metagenome (100%)
1 1129 bp 53.41 4.87 99.65
qh_9_scaffold_23497
Species: BJP_IG2102_Gammaproteobacteria_62_140 (100%)
1 1088 bp 50.92 4.87 83.55
qh_9_scaffold_45305 2 1397 bp 51.32 4.87 26.20
qh_9_scaffold_12097
Species: uncultured bacterium (50%)
2 1688 bp 31.46 4.86 81.58
qh_9_scaffold_20162
Species: Guillardia theta (50%)
2 1213 bp 56.55 4.86 52.93
qh_9_scaffold_15826
Species: Aureococcus anophagefferens (50%)
2 1420 bp 52.68 4.86 87.46
qh_9_scaffold_22302 1 1131 bp 52.17 4.86 99.73
qh_9_scaffold_25405 2 1028 bp 61.28 4.86 61.28
Displaying items 21751-21800 of 22383 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.