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QH_9_UNK

In projects: QH_9  |  diaphorachaeota

Metagenomic Context

METAGENOME

Properties

Avg. coverage: 22.86 Longest contig: 67.25 Kbp Bin length: 50.11 Mbp GC content: 61.51 %
Contigs count: 22383 Features count: 65940 rRNAs count: 15 tRNAs count: 0

Genome completeness

megabin RP 51 / 55 MC: 48 BSCG 44 / 51 MC: 40 ASCG 38 / 38 MC: 38
Displaying items 22301-22350 of 22383 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
qh_9_scaffold_15829
Class: Halobacteria (50%)
4 1419 bp 39.25 3.88 76.96
qh_9_scaffold_15839
Species: Candidatus Nanosalinarum sp. J07AB56 (50%)
2 1419 bp 35.17 3.88 90.06
qh_9_scaffold_22979
Species: Halogranum salarium (50%)
2 1107 bp 30.80 3.88 79.67
qh_9_scaffold_19585 2 1236 bp 59.14 3.88 56.55
qh_9_scaffold_22172 3 1136 bp 39.52 3.87 85.04
qh_9_scaffold_19497 4 1239 bp 34.95 3.87 83.05
qh_9_scaffold_26038
Species: Cyanophage TIM40 (50%)
2 1010 bp 43.56 3.86 93.56
qh_9_scaffold_22814 3 1113 bp 48.25 3.86 75.47
qh_9_scaffold_18197
Species: Candidatus Entotheonella sp. TSY1 (100%)
1 1299 bp 44.73 3.85 89.15
qh_9_scaffold_21155 2 1173 bp 38.96 3.84 50.38
qh_9_scaffold_19208 3 1253 bp 41.74 3.83 88.83
qh_9_scaffold_24840
Species: Pseudomonas fulva (50%)
2 1045 bp 54.26 3.83 74.64
qh_9_scaffold_8227 1 2139 bp 49.42 3.83 87.80
qh_9_scaffold_22489 1 1125 bp 45.51 3.82 86.13
qh_9_scaffold_23843
Species: uncultured archaeon A07HR60 (100%)
1 1076 bp 54.93 3.81 82.53
qh_9_scaffold_18478 3 1285 bp 49.73 3.81 49.26
qh_9_scaffold_22280 1 1132 bp 41.78 3.80 99.91
qh_9_scaffold_11813
Class: Halobacteria (66.67%)
3 1717 bp 39.25 3.79 80.02
qh_9_scaffold_21494 3 1160 bp 39.48 3.79 76.81
qh_9_scaffold_22844 1 1112 bp 53.33 3.78 7.28
qh_9_scaffold_12637 2 1643 bp 40.96 3.77 95.31
qh_9_scaffold_18168
Species: Halococcus salifodinae (100%)
1 1300 bp 41.15 3.77 99.69
qh_9_scaffold_12015
Species: Candidatus Entotheonella sp. TSY1 (50%)
2 1697 bp 43.96 3.77 97.58
qh_9_scaffold_24069
Species: Halalkalicoccus jeotgali (100%)
1 1069 bp 44.90 3.74 99.91
qh_9_scaffold_17895 3 1313 bp 51.41 3.73 85.91
qh_9_scaffold_24772 4 1047 bp 50.05 3.72 100.00
qh_9_scaffold_21633 1 1156 bp 56.75 3.72 92.13
qh_9_scaffold_27096
Species: Haloarcula japonica (50%)
2 1667 bp 44.93 3.72 27.17
qh_9_scaffold_18857
Domain: Archaea (66.67%)
3 1267 bp 42.78 3.71 93.76
qh_9_scaffold_23769 2 1079 bp 57.83 3.71 68.12
qh_9_scaffold_21309 2 1168 bp 44.95 3.68 81.16
qh_9_scaffold_21317
Species: Calothrix sp. PCC 7103 (50%)
2 1167 bp 48.84 3.68 97.43
qh_9_scaffold_28855 2 1765 bp 35.69 3.68 43.85
qh_9_scaffold_19221 3 1252 bp 40.58 3.67 89.38
qh_9_scaffold_23389 1 1091 bp 50.05 3.67 99.82
qh_9_scaffold_19137 4 1255 bp 33.86 3.67 93.71
qh_9_scaffold_19719
Species: Cyclobacteriaceae bacterium AK24 (100%)
1 1231 bp 49.15 3.66 99.92
qh_9_scaffold_13334
Species: RBG_16_Ignavibacteria_34_14_curated (50%)
2 1590 bp 39.87 3.65 73.02
qh_9_scaffold_16180
Species: Halalkalicoccus jeotgali (50%)
2 1400 bp 52.07 3.64 73.71
qh_9_scaffold_24011
Species: Haloarcula marismortui (50%)
2 1071 bp 35.76 3.64 38.38
qh_9_scaffold_19495
Species: Haloferax denitrificans (100%)
1 1240 bp 43.87 3.63 92.90
qh_9_scaffold_11846
Species: Otolemur garnettii (50%)
2 1714 bp 57.82 3.62 54.96
qh_9_scaffold_20073 1 1216 bp 42.85 3.62 63.90
qh_9_scaffold_18676 2 1276 bp 52.98 3.61 99.45
qh_9_scaffold_15393
Species: Haladaptatus paucihalophilus (50%)
2 1448 bp 52.42 3.59 100.07
qh_9_scaffold_15686 3 1429 bp 33.73 3.57 79.15
qh_9_scaffold_21737
Species: Halogeometricum pallidum (100%)
1 1151 bp 41.44 3.56 99.83
qh_9_scaffold_26022 3 1010 bp 44.75 3.56 98.61
qh_9_scaffold_25711 1 1019 bp 36.90 3.53 77.13
qh_9_scaffold_25715 4 1019 bp 39.74 3.53 101.28
Displaying items 22301-22350 of 22383 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.