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QH_9_UNK

In projects: QH_9  |  diaphorachaeota

Metagenomic Context

METAGENOME

Properties

Avg. coverage: 22.86 Longest contig: 67.25 Kbp Bin length: 50.11 Mbp GC content: 61.51 %
Contigs count: 22383 Features count: 65940 rRNAs count: 15 tRNAs count: 0

Genome completeness

megabin RP 51 / 55 MC: 48 BSCG 44 / 51 MC: 40 ASCG 38 / 38 MC: 38
Displaying items 451-500 of 22383 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
qh_9_scaffold_11901
Order: Haloferacales (66.67%)
3 1707 bp 68.60 45.64 100.35
qh_9_scaffold_17261
Genus: Haloferax (100%)
3 1994 bp 64.69 18.31 100.35
qh_9_scaffold_21993
Species: Halorubrum coriense (50%)
2 1142 bp 70.75 8.06 100.35
qh_9_scaffold_9142
Species: Halorubrum sp. AJ67 (100%)
2 2003 bp 66.15 19.82 100.35
qh_9_scaffold_21930
Species: Natronomonas pharaonis (50%)
4 1145 bp 71.79 36.86 100.35
qh_9_scaffold_11754
Species: Halosimplex carlsbadense (50%)
2 1722 bp 69.69 32.87 100.35
qh_9_scaffold_25640
Order: Halobacteriales (66.67%)
3 2024 bp 64.82 11.22 100.35
qh_9_scaffold_21597
Species: Haloferax larsenii (50%)
2 1157 bp 65.17 9.25 100.35
qh_9_scaffold_21274
Species: Haloarcula marismortui (66.67%)
3 1169 bp 67.24 13.52 100.34
qh_9_scaffold_21284
Species: Natronomonas pharaonis (66.67%)
3 1169 bp 72.28 39.26 100.34
qh_9_scaffold_21186
Species: Halosimplex carlsbadense (50%)
2 1172 bp 63.31 8.62 100.34
qh_9_scaffold_21021
Order: Halobacteriales (100%)
3 1178 bp 63.33 9.34 100.34
qh_9_scaffold_5705 3 2655 bp 47.19 9.49 100.34
qh_9_scaffold_20939
Species: Natrinema sp. J7-2 (50%)
2 1181 bp 70.36 33.78 100.34
qh_9_scaffold_6795
Genus: Haloarcula (100%)
3 2963 bp 70.50 13.43 100.34
qh_9_scaffold_10836
Species: Halogeometricum pallidum (100%)
5 3304 bp 70.61 17.46 100.33
qh_9_scaffold_40632
Species: Halogranum salarium (50%)
2 1202 bp 69.13 36.27 100.33
qh_9_scaffold_20434
Species: Haladaptatus paucihalophilus (50%)
2 1202 bp 65.56 14.81 100.33
qh_9_scaffold_10859
Domain: Bacteria (66.67%)
3 1803 bp 56.85 7.93 100.33
qh_9_scaffold_20281
Species: Clostridiaceae bacterium BRH_c20a (50%)
2 1208 bp 69.78 9.35 100.33
qh_9_scaffold_8363
Species: Haloarcula marismortui (100%)
2 2117 bp 55.64 12.47 100.33
qh_9_scaffold_20122
Species: halophilic archaeon J07HX5 (50%)
2 1214 bp 65.57 8.32 100.33
qh_9_scaffold_19608
Species: Haloterrigena salina (50%)
2 1235 bp 54.01 5.67 100.32
qh_9_scaffold_19621
Species: RBG_16_Chloroflexi_57_11_curated (50%)
2 1235 bp 52.63 5.67 100.32
qh_9_scaffold_19468
Species: Halorubrum californiense (50%)
2 1241 bp 72.76 18.29 100.32
qh_9_scaffold_10313
Class: Halobacteria (66.67%)
3 1863 bp 71.71 26.36 100.32
qh_9_scaffold_1328
Species: Natrialba hulunbeirensis (50%)
6 5903 bp 54.46 18.14 100.32
qh_9_scaffold_7930
Species: Natronomonas moolapensis (100%)
3 2186 bp 67.20 79.23 100.32
qh_9_scaffold_13563
Species: Halosimplex carlsbadense (66.67%)
3 2527 bp 70.72 27.42 100.32
qh_9_scaffold_7766
Species: Natronomonas pharaonis (100%)
2 2216 bp 65.25 70.31 100.32
qh_9_scaffold_18847
Genus: Halovivax (66.67%)
3 1268 bp 73.42 31.94 100.32
qh_9_scaffold_13398
Order: Halobacteriales (66.67%)
3 1585 bp 64.48 17.92 100.32
qh_9_scaffold_13321
Order: Natrialbales (66.67%)
3 1591 bp 54.05 13.45 100.31
qh_9_scaffold_7690
Order: Halobacteriales (50%)
6 2228 bp 67.68 21.63 100.31
qh_9_scaffold_13234 5 1597 bp 41.77 6.39 100.31
qh_9_scaffold_18587
Species: Haloarcula argentinensis (50%)
2 1280 bp 69.45 49.14 100.31
qh_9_scaffold_3374
Species: Salinibacter ruber (66.67%)
3 4169 bp 63.85 109.95 100.31
qh_9_scaffold_18521
Species: Natronomonas moolapensis (100%)
2 1283 bp 69.60 57.76 100.31
qh_9_scaffold_4095
Species: Halococcus thailandensis (100%)
4 3209 bp 58.96 15.99 100.31
qh_9_scaffold_9750
Species: Haloarcula hispanica (50%)
2 1926 bp 59.87 10.38 100.31
qh_9_scaffold_18318
Species: Haloarcula vallismortis (50%)
2 1292 bp 70.36 15.48 100.31
qh_9_scaffold_12881
Species: Natronomonas pharaonis (50%)
2 1624 bp 68.66 11.45 100.31
qh_9_scaffold_17980
Species: Halomicrobium mukohataei (50%)
2 1310 bp 72.82 25.73 100.31
qh_9_scaffold_12450
Class: Halobacteria (100%)
3 1657 bp 72.78 10.38 100.30
qh_9_scaffold_26270
Species: Natronobacterium gregoryi (50%)
2 1002 bp 70.66 22.46 100.30
qh_9_scaffold_17417
Species: Halococcus thailandensis (66.67%)
3 1337 bp 56.54 10.25 100.30
qh_9_scaffold_17352
Species: halophilic archaeon J07HX5 (100%)
2 1340 bp 67.84 23.88 100.30
qh_9_scaffold_17362
Species: Natronomonas moolapensis (100%)
2 1340 bp 64.70 11.64 100.30
qh_9_scaffold_26185
Species: Natrinema altunense (50%)
2 1005 bp 55.22 6.97 100.30
qh_9_scaffold_12209
Species: Halorubrum tebenquichense (50%)
2 1678 bp 70.92 10.49 100.30
Displaying items 451-500 of 22383 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.