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QH_9_UNK

In projects: QH_9  |  diaphorachaeota

Metagenomic Context

METAGENOME

Properties

Avg. coverage: 22.86 Longest contig: 67.25 Kbp Bin length: 50.11 Mbp GC content: 61.51 %
Contigs count: 22383 Features count: 65940 rRNAs count: 15 tRNAs count: 0

Genome completeness

megabin RP 51 / 55 MC: 48 BSCG 44 / 51 MC: 40 ASCG 38 / 38 MC: 38
Displaying items 501-550 of 22383 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
qh_9_scaffold_26095
Species: halophilic archaeon J07HB67 (50%)
2 1008 bp 64.58 32.14 100.30
qh_9_scaffold_7003
Order: Haloferacales (50%)
4 2354 bp 52.72 14.40 100.30
qh_9_scaffold_26007
Species: Natrialba magadii (50%)
2 1011 bp 62.91 7.91 100.30
qh_9_scaffold_25896
Species: Halococcus salifodinae (50%)
2 1014 bp 63.71 11.34 100.30
qh_9_scaffold_25674
Species: Halorubrum lacusprofundi (50%)
2 1020 bp 65.78 11.76 100.29
qh_9_scaffold_25572
Species: Thermoanaerobacterium thermosaccharolyticum (50%)
2 1023 bp 66.47 44.77 100.29
qh_9_scaffold_5390
Species: uncultured haloarchaeon (50%)
2 2737 bp 33.32 4.60 100.29
qh_9_scaffold_16717
Species: Candidatus Halobonum tyrrellensis (50%)
2 1373 bp 72.47 24.69 100.29
qh_9_scaffold_16734
Species: halophilic archaeon J07HB67 (66.67%)
3 1373 bp 69.70 7.43 100.29
qh_9_scaffold_14151
Class: Halobacteria (66.67%)
3 2061 bp 65.26 18.44 100.29
qh_9_scaffold_11702
Species: Halosimplex carlsbadense (50%)
2 1726 bp 72.07 11.65 100.29
qh_9_scaffold_16487
Species: Salinibacter ruber (100%)
2 1385 bp 65.13 18.27 100.29
qh_9_scaffold_24952
Species: Halorubrum tebenquichense (50%)
2 1041 bp 66.95 14.60 100.29
qh_9_scaffold_19305
Species: Halorubrum lacusprofundi (100%)
2 2094 bp 55.21 5.87 100.29
qh_9_scaffold_16166
Genus: Haloarcula (50%)
4 1400 bp 69.50 10.71 100.29
qh_9_scaffold_16171
Species: Haloterrigena limicola (50%)
2 1400 bp 68.00 45.57 100.29
qh_9_scaffold_16182
Species: Halococcus hamelinensis (50%)
2 1400 bp 70.50 11.43 100.29
qh_9_scaffold_24417 2 1059 bp 64.59 5.29 100.28
qh_9_scaffold_15909
Species: Natronomonas pharaonis (50%)
2 1415 bp 69.47 54.77 100.28
qh_9_scaffold_11158 3 1774 bp 54.57 5.13 100.28
qh_9_scaffold_23919 2 1074 bp 45.16 32.22 100.28
qh_9_scaffold_23926 2 1074 bp 44.79 24.30 100.28
qh_9_scaffold_23933
Species: Haladaptatus paucihalophilus (50%)
2 1074 bp 73.46 10.34 100.28
qh_9_scaffold_23669
Species: Halosimplex carlsbadense (100%)
3 1083 bp 69.81 9.70 100.28
qh_9_scaffold_15443
Species: Halogranum salarium (50%)
2 1445 bp 67.40 22.35 100.28
qh_9_scaffold_15394
Species: Haloarcula californiae (50%)
2 1448 bp 70.86 8.49 100.28
qh_9_scaffold_23541
Species: Natronomonas moolapensis (50%)
2 1086 bp 72.84 23.11 100.28
qh_9_scaffold_23467
Species: Halosimplex carlsbadense (100%)
2 1089 bp 68.14 14.69 100.28
qh_9_scaffold_10736
Species: Halomicrobium mukohataei (100%)
2 1816 bp 53.14 7.43 100.28
qh_9_scaffold_23381
Species: Haloquadratum sp. J07HQX50 (50%)
2 1092 bp 69.41 9.71 100.28
qh_9_scaffold_23127
Species: Natronomonas pharaonis (50%)
2 1101 bp 73.21 62.58 100.27
qh_9_scaffold_22558
Species: Haloarcula japonica (50%)
2 1122 bp 73.80 15.69 100.27
qh_9_scaffold_31475
Species: Haloterrigena turkmenica (50%)
2 1499 bp 65.98 31.75 100.27
qh_9_scaffold_22466
Species: Natronomonas moolapensis (50%)
2 1125 bp 72.00 27.47 100.27
qh_9_scaffold_22472
Species: Natronomonas moolapensis (100%)
3 1125 bp 68.98 8.89 100.27
qh_9_scaffold_14570
Class: Halobacteria (66.67%)
3 1502 bp 72.24 32.09 100.27
qh_9_scaffold_22148
Species: Halobacterium salinarum (66.67%)
3 1137 bp 63.59 50.66 100.26
qh_9_scaffold_21895
Species: Haloferax denitrificans (50%)
2 1146 bp 68.06 14.40 100.26
qh_9_scaffold_21782
Species: Natronorubrum bangense (50%)
2 1149 bp 66.23 12.01 100.26
qh_9_scaffold_21637
Species: Rhodothermus marinus (66.67%)
3 1155 bp 56.19 7.97 100.26
qh_9_scaffold_21643
Species: Halorhabdus tiamatea (50%)
2 1155 bp 69.35 6.15 100.26
qh_9_scaffold_13958
Species: halophilic archaeon J07HX64 (66.67%)
3 1544 bp 68.33 25.32 100.26
qh_9_scaffold_13765
Species: Haloferax elongans (100%)
2 1556 bp 58.93 11.63 100.26
qh_9_scaffold_21238
Species: halophilic archaeon J07HX64 (66.67%)
3 1170 bp 67.52 12.31 100.26
qh_9_scaffold_21152
Species: halophilic archaeon J07HB67 (100%)
2 1173 bp 68.46 10.32 100.26
qh_9_scaffold_21075
Species: Haloarcula amylolytica (50%)
2 1176 bp 63.01 8.93 100.26
qh_9_scaffold_14990
Order: Natrialbales (50%)
4 2750 bp 67.71 15.53 100.26
qh_9_scaffold_20981
Species: Halorubrum saccharovorum (50%)
2 1179 bp 67.51 21.29 100.25
qh_9_scaffold_20844
Species: Haloquadratum walsbyi (50%)
2 1185 bp 57.97 15.44 100.25
qh_9_scaffold_20858
Species: halophilic archaeon DL31 (100%)
2 1185 bp 73.08 7.26 100.25
Displaying items 501-550 of 22383 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.