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QH_9_UNK

In projects: QH_9  |  diaphorachaeota

Metagenomic Context

METAGENOME

Properties

Avg. coverage: 22.86 Longest contig: 67.25 Kbp Bin length: 50.11 Mbp GC content: 61.51 %
Contigs count: 22383 Features count: 65940 rRNAs count: 15 tRNAs count: 0

Genome completeness

megabin RP 51 / 55 MC: 48 BSCG 44 / 51 MC: 40 ASCG 38 / 38 MC: 38
Displaying items 601-650 of 22383 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
qh_9_scaffold_4289 5 3131 bp 47.24 25.42 100.22
qh_9_scaffold_7607
Species: Bacteroides reticulotermitis (50%)
2 2242 bp 56.02 6.51 100.22
qh_9_scaffold_10938
Species: Halosimplex carlsbadense (66.67%)
3 1796 bp 66.04 11.53 100.22
qh_9_scaffold_17220
Species: Halorubrum distributum (50%)
2 1347 bp 70.45 44.69 100.22
qh_9_scaffold_16851
Species: Haloferax mediterranei (50%)
2 1365 bp 69.52 16.04 100.22
qh_9_scaffold_16852
Species: Halorubrum hochstenium (50%)
2 1365 bp 71.72 9.67 100.22
qh_9_scaffold_7303
Species: Halococcus hamelinensis (100%)
2 2293 bp 57.04 6.41 100.22
qh_9_scaffold_16584
Species: Halopiger xanaduensis (50%)
2 1380 bp 63.62 24.20 100.22
qh_9_scaffold_10449
Species: Halobiforma lacisalsi (50%)
2 1847 bp 69.57 55.77 100.22
qh_9_scaffold_36819
Species: Desulfotomaculum gibsoniae (50%)
2 1398 bp 59.01 5.44 100.22
qh_9_scaffold_16147
Species: Halomicrobium mukohataei (50%)
2 1401 bp 64.03 8.78 100.21
qh_9_scaffold_15907
Species: Haloarcula vallismortis (50%)
2 1416 bp 62.22 11.65 100.21
qh_9_scaffold_34879
Species: Natronomonas moolapensis (50%)
2 1422 bp 71.94 51.13 100.21
qh_9_scaffold_33631
Species: halophilic archaeon J07HX64 (100%)
2 1437 bp 64.44 7.79 100.21
qh_9_scaffold_15477
Class: Halobacteria (66.67%)
3 1443 bp 65.84 6.58 100.21
qh_9_scaffold_16783
Order: Halobacteriales (75%)
4 2413 bp 67.76 14.13 100.21
qh_9_scaffold_15377
Species: Salinibacter ruber (50%)
2 1449 bp 66.32 44.93 100.21
qh_9_scaffold_15240
Species: Haloferax mucosum (50%)
2 1458 bp 75.86 18.18 100.21
qh_9_scaffold_4799
Species: Natronomonas pharaonis (50%)
4 2928 bp 71.48 51.84 100.21
qh_9_scaffold_14969
Species: Natronorubrum tibetense (50%)
2 1476 bp 55.56 6.78 100.20
qh_9_scaffold_12813
Order: Haloferacales (50%)
4 4446 bp 64.04 18.15 100.20
qh_9_scaffold_14782
Species: Natrinema sp. J7-2 (50%)
2 1488 bp 70.70 8.94 100.20
qh_9_scaffold_6349
Species: Natronomonas pharaonis (66.67%)
3 2497 bp 73.37 69.28 100.20
qh_9_scaffold_26351
Species: Natrialba aegyptia (50%)
2 1000 bp 67.30 9.70 100.20
qh_9_scaffold_26239
Species: Halovirus HCTV-2 (50%)
2 1003 bp 63.81 3.99 100.20
qh_9_scaffold_26247
Species: Halorubrum lipolyticum (100%)
2 1003 bp 54.44 6.98 100.20
qh_9_scaffold_25966
Species: Halorubrum sp. AJ67 (50%)
2 1012 bp 65.81 7.71 100.20
qh_9_scaffold_25641
Species: Halostagnicola sp. A56 (100%)
2 1021 bp 63.76 33.89 100.20
qh_9_scaffold_25562
Species: Halococcus saccharolyticus (50%)
2 1024 bp 73.14 50.29 100.20
qh_9_scaffold_14052
Species: Haloferax elongans (50%)
2 1539 bp 56.08 11.76 100.20
qh_9_scaffold_25423
Species: Halococcus thailandensis (50%)
2 1027 bp 69.13 51.70 100.20
qh_9_scaffold_13999
Species: Halostagnicola sp. A56 (50%)
2 1542 bp 66.41 11.41 100.20
qh_9_scaffold_22888
Species: Natronomonas pharaonis (66.67%)
3 2057 bp 63.39 8.70 100.19
qh_9_scaffold_25315
Species: Halosimplex carlsbadense (100%)
2 1030 bp 73.50 16.12 100.19
qh_9_scaffold_13898
Species: Halorhabdus tiamatea (50%)
2 1548 bp 70.22 10.14 100.19
qh_9_scaffold_13845
Species: Natronomonas pharaonis (50%)
2 1551 bp 67.44 83.11 100.19
qh_9_scaffold_25108
Species: Halogeometricum pallidum (50%)
2 1036 bp 63.13 10.52 100.19
qh_9_scaffold_25109
Species: Haloarcula hispanica (100%)
2 1036 bp 55.98 11.97 100.19
qh_9_scaffold_13756 3 1557 bp 60.31 9.89 100.19
qh_9_scaffold_8615 3 2078 bp 67.66 14.63 100.19
qh_9_scaffold_13656
Species: Haloquadratum walsbyi (50%)
2 1566 bp 63.54 9.00 100.19
qh_9_scaffold_24739
Species: Natronomonas moolapensis (50%)
2 1048 bp 66.41 12.69 100.19
qh_9_scaffold_24740
Species: Methanosarcina mazei (50%)
2 1048 bp 62.21 29.58 100.19
qh_9_scaffold_24750 3 1048 bp 66.13 7.06 100.19
qh_9_scaffold_24635
Species: Ixodes scapularis (50%)
2 1051 bp 59.75 4.09 100.19
qh_9_scaffold_24636
Species: Haloferax larsenii (50%)
2 1051 bp 51.76 4.28 100.19
qh_9_scaffold_24467
Species: Haloterrigena thermotolerans (50%)
2 1057 bp 67.08 10.12 100.19
qh_9_scaffold_24472
Species: Salinibacter ruber (100%)
2 1057 bp 67.74 7.76 100.19
qh_9_scaffold_24358
Species: Halococcus salifodinae (100%)
2 1060 bp 71.04 28.58 100.19
qh_9_scaffold_13296
Species: Haloferax mediterranei (50%)
2 1593 bp 74.51 12.18 100.19
Displaying items 601-650 of 22383 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.