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QH_9_UNK

In projects: QH_9  |  diaphorachaeota

Metagenomic Context

METAGENOME

Properties

Avg. coverage: 22.86 Longest contig: 67.25 Kbp Bin length: 50.11 Mbp GC content: 61.51 %
Contigs count: 22383 Features count: 65940 rRNAs count: 15 tRNAs count: 0

Genome completeness

megabin RP 51 / 55 MC: 48 BSCG 44 / 51 MC: 40 ASCG 38 / 38 MC: 38
Displaying items 651-700 of 22383 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
qh_9_scaffold_13298
Species: Haloarcula hispanica (50%)
2 1593 bp 68.24 8.98 100.19
qh_9_scaffold_24155
Species: Natronococcus jeotgali (50%)
2 1066 bp 72.70 32.46 100.19
qh_9_scaffold_24156
Species: Halorubrum hochstenium (100%)
2 1066 bp 71.58 12.48 100.19
qh_9_scaffold_24169
Species: Methanocella arvoryzae (50%)
2 1066 bp 63.60 4.78 100.19
qh_9_scaffold_8268
Species: Halostagnicola larsenii (100%)
2 2132 bp 71.06 45.08 100.19
qh_9_scaffold_23981 3 1072 bp 49.25 5.50 100.19
qh_9_scaffold_23988
Species: halophilic archaeon J07HX5 (100%)
2 1072 bp 69.96 7.74 100.19
qh_9_scaffold_23995
Species: Natronococcus amylolyticus (50%)
2 1072 bp 65.02 15.86 100.19
qh_9_scaffold_23902
Species: Haloferax volcanii (50%)
2 1075 bp 57.95 6.88 100.19
qh_9_scaffold_8164
Species: Haloarcula vallismortis (50%)
2 2150 bp 69.86 16.33 100.19
qh_9_scaffold_12854
Species: Natronomonas pharaonis (100%)
2 1626 bp 69.50 21.28 100.18
qh_9_scaffold_22403
Species: Halorubrum tebenquichense (100%)
2 1629 bp 68.69 11.54 100.18
qh_9_scaffold_23347
Species: Halorhabdus tiamatea (50%)
2 1093 bp 68.07 12.81 100.18
qh_9_scaffold_12659
Class: Halobacteria (66.67%)
3 1641 bp 65.57 8.04 100.18
qh_9_scaffold_12662
Species: Haloferax elongans (50%)
2 1641 bp 65.69 46.62 100.18
qh_9_scaffold_23025
Species: Halomicrobium mukohataei (50%)
2 1105 bp 62.17 8.24 100.18
qh_9_scaffold_23043 4 1105 bp 54.75 7.42 100.18
qh_9_scaffold_22929
Species: Halomicrobium mukohataei (50%)
2 1108 bp 71.21 7.85 100.18
qh_9_scaffold_22935
Species: Candidatus Halobonum tyrrellensis (50%)
2 1108 bp 67.06 10.11 100.18
qh_9_scaffold_22943
Species: halophilic archaeon DL31 (100%)
2 1108 bp 67.78 8.39 100.18
qh_9_scaffold_22876
Species: Halorubrum tebenquichense (50%)
2 1111 bp 70.21 12.42 100.18
qh_9_scaffold_31545
Species: Halococcus hamelinensis (50%)
2 1671 bp 67.27 10.23 100.18
qh_9_scaffold_22530
Species: Halorhabdus tiamatea (100%)
2 1123 bp 57.88 15.76 100.18
qh_9_scaffold_22452
Species: Halorubrum hochstenium (50%)
2 1126 bp 70.07 11.01 100.18
qh_9_scaffold_22355
Species: Halorhabdus utahensis (50%)
2 1129 bp 69.09 11.16 100.18
qh_9_scaffold_21369
Species: Halococcus salifodinae (100%)
2 1707 bp 73.11 24.19 100.18
qh_9_scaffold_22113
Species: R_Burkholderiales_61_11 (50%)
2 1138 bp 61.69 32.78 100.18
qh_9_scaffold_22021
Species: Halorubrum coriense (50%)
2 1141 bp 70.99 9.82 100.18
qh_9_scaffold_21934
Species: Halosimplex carlsbadense (50%)
2 1144 bp 74.56 9.53 100.18
qh_9_scaffold_21944
Species: Halosimplex carlsbadense (66.67%)
3 1144 bp 67.92 10.05 100.18
qh_9_scaffold_11780
Species: Rhodothermus marinus (100%)
2 1719 bp 65.39 10.01 100.18
qh_9_scaffold_21856
Species: Natronomonas moolapensis (100%)
2 1147 bp 64.43 14.12 100.17
qh_9_scaffold_11707
Species: Halococcus saccharolyticus (100%)
2 1725 bp 68.06 10.90 100.17
qh_9_scaffold_22665
Species: Halococcus salifodinae (50%)
2 1728 bp 71.35 42.30 100.17
qh_9_scaffold_21611
Species: Haliangium ochraceum (50%)
2 1156 bp 64.19 6.40 100.17
qh_9_scaffold_21624 2 1156 bp 49.48 4.67 100.17
qh_9_scaffold_21634
Species: CG_Omnitr_02 (50%)
2 1156 bp 62.63 9.43 100.17
qh_9_scaffold_21511
Species: CG_Ignavi_02 (50%)
2 1159 bp 49.27 4.57 100.17
qh_9_scaffold_21371
Species: uncultured archaeon A07HB70 (100%)
2 1165 bp 64.46 8.50 100.17
qh_9_scaffold_21212
Species: Natronorubrum tibetense (50%)
2 1171 bp 67.29 9.22 100.17
qh_9_scaffold_21223
Species: Natronomonas moolapensis (50%)
2 1171 bp 72.50 76.00 100.17
qh_9_scaffold_21036
Species: Halosimplex carlsbadense (100%)
2 1177 bp 69.16 10.11 100.17
qh_9_scaffold_11240
Species: Natrialba hulunbeirensis (100%)
2 1767 bp 59.65 9.45 100.17
qh_9_scaffold_42362
Species: Salinibacter ruber (100%)
2 1183 bp 67.29 168.00 100.17
qh_9_scaffold_20824
Species: Natrinema sp. J7-2 (50%)
2 1186 bp 72.68 12.82 100.17
qh_9_scaffold_20758
Species: halophilic archaeon DL31 (100%)
2 1189 bp 51.39 4.54 100.17
qh_9_scaffold_6798
Species: halophilic archaeon J07HX5 (50%)
2 2393 bp 71.46 11.28 100.17
qh_9_scaffold_20610
Species: Salinarchaeum sp. Harcht-Bsk1 (50%)
2 1198 bp 68.78 34.39 100.17
qh_9_scaffold_20366 2 1204 bp 56.73 6.40 100.17
qh_9_scaffold_10629
Species: Natronomonas pharaonis (100%)
2 1827 bp 72.09 30.49 100.16
Displaying items 651-700 of 22383 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.