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QH_9_UNK

In projects: QH_9  |  diaphorachaeota

Metagenomic Context

METAGENOME

Properties

Avg. coverage: 22.86 Longest contig: 67.25 Kbp Bin length: 50.11 Mbp GC content: 61.51 %
Contigs count: 22383 Features count: 65940 rRNAs count: 15 tRNAs count: 0

Genome completeness

megabin RP 51 / 55 MC: 48 BSCG 44 / 51 MC: 40 ASCG 38 / 38 MC: 38
Displaying items 201-250 of 22383 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
qh_9_scaffold_25157 3 1658 bp 51.51 4.28 47.95
qh_9_scaffold_20080 1 1216 bp 41.78 4.28 80.43
qh_9_scaffold_25457 1 1026 bp 58.97 4.29 99.71
qh_9_scaffold_22043
Phylum: Cyanobacteria (66.67%)
3 1141 bp 30.32 4.29 71.52
qh_9_scaffold_24668 2 1050 bp 54.29 4.29 63.43
qh_9_scaffold_19582
Species: Fibrella aestuarina (100%)
1 1236 bp 53.24 4.29 74.03
qh_9_scaffold_24744 1 1048 bp 40.46 4.29 99.62
qh_9_scaffold_23306
Species: Emiliania huxleyi (100%)
1 1094 bp 43.33 4.30 99.82
qh_9_scaffold_15501 5 1442 bp 37.31 4.30 97.78
qh_9_scaffold_15512
Species: Haloterrigena thermotolerans (50%)
2 1441 bp 49.62 4.30 97.43
qh_9_scaffold_18120 2 1302 bp 45.31 4.30 30.65
qh_9_scaffold_22713
Species: Prevotella sp. CAG:1092 (50%)
2 1116 bp 33.96 4.30 91.94
qh_9_scaffold_12001
Species: Salinibacter ruber (50%)
2 1698 bp 50.71 4.30 88.34
qh_9_scaffold_25664 1 1020 bp 46.27 4.31 89.41
qh_9_scaffold_19207
Species: uncultured haloarchaeon (100%)
1 1253 bp 44.05 4.31 99.36
qh_9_scaffold_17708 3 1323 bp 42.33 4.31 67.35
qh_9_scaffold_22105 2 1138 bp 42.79 4.31 99.65
qh_9_scaffold_24210
Species: RBG_16_Micrarchaeota_36_9_curated (50%)
2 1065 bp 50.99 4.32 79.44
qh_9_scaffold_14528
Species: Triatoma infestans (100%)
1 1506 bp 52.59 4.32 99.80
qh_9_scaffold_8327 3 2123 bp 53.51 4.33 77.16
qh_9_scaffold_16916
Species: Rhodothermus marinus (50%)
2 2330 bp 47.21 4.33 100.82
qh_9_scaffold_17859
Species: Bacteroides faecis CAG:32 (50%)
2 1315 bp 53.92 4.33 91.25
qh_9_scaffold_18822
Species: Salinibacter ruber (50%)
2 1269 bp 59.81 4.33 91.96
qh_9_scaffold_21675 2 1154 bp 54.33 4.33 96.45
qh_9_scaffold_7383 3 2279 bp 52.57 4.34 44.89
qh_9_scaffold_25906 1 1013 bp 61.99 4.34 99.80
qh_9_scaffold_25082
Species: His2 virus (50%)
2 1037 bp 52.17 4.34 100.68
qh_9_scaffold_24401 1 1059 bp 49.39 4.34 47.59
qh_9_scaffold_17892 2 1313 bp 36.02 4.34 90.48
qh_9_scaffold_16050 3 1406 bp 34.42 4.34 72.76
qh_9_scaffold_20522 1 1199 bp 44.62 4.34 80.07
qh_9_scaffold_17955 3 1310 bp 55.11 4.35 67.33
qh_9_scaffold_25239
Species: Aphanomyces astaci (100%)
1 1032 bp 53.00 4.36 99.71
qh_9_scaffold_25255 1 1032 bp 54.84 4.36 31.10
qh_9_scaffold_16220
Species: Haloferax larsenii (50%)
2 1398 bp 37.05 4.36 99.79
qh_9_scaffold_19526 1 1238 bp 39.18 4.36 97.66
qh_9_scaffold_14729 3 1492 bp 49.73 4.36 70.78
qh_9_scaffold_23763
Species: Thioploca ingrica (100%)
1 1079 bp 47.27 4.36 77.29
qh_9_scaffold_14763 2 1490 bp 60.20 4.36 73.49
qh_9_scaffold_26063
Species: Halopiger xanaduensis (100%)
1 1009 bp 47.87 4.36 97.82
qh_9_scaffold_21896
Species: Salinibacter ruber (100%)
2 1146 bp 60.21 4.36 62.04
qh_9_scaffold_18702
Species: Halosimplex carlsbadense (50%)
2 2087 bp 46.77 4.36 43.27
qh_9_scaffold_12308
Species: Pediococcus pentosaceus (50%)
2 1669 bp 42.78 4.37 92.21
qh_9_scaffold_23179 1 1099 bp 56.14 4.37 99.64
qh_9_scaffold_19580 4 1236 bp 54.37 4.37 63.11
qh_9_scaffold_14789 2 1488 bp 49.87 4.37 32.26
qh_9_scaffold_13176
Species: Dactylococcopsis salina (100%)
3 1601 bp 50.28 4.37 95.57
qh_9_scaffold_28669
Species: Ichthyophthirius multifiliis (50%)
2 1711 bp 54.24 4.38 72.59
qh_9_scaffold_17208 3 1347 bp 38.98 4.38 90.42
qh_9_scaffold_18146 1 1301 bp 52.19 4.38 19.37
Displaying items 201-250 of 22383 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.