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QH_9_UNK

In projects: QH_9  |  diaphorachaeota

Metagenomic Context

METAGENOME

Properties

Avg. coverage: 22.86 Longest contig: 67.25 Kbp Bin length: 50.11 Mbp GC content: 61.51 %
Contigs count: 22383 Features count: 65940 rRNAs count: 15 tRNAs count: 0

Genome completeness

megabin RP 51 / 55 MC: 48 BSCG 44 / 51 MC: 40 ASCG 38 / 38 MC: 38
Displaying items 251-300 of 22383 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
qh_9_scaffold_10687 3 1821 bp 55.57 4.39 51.07
qh_9_scaffold_8314 5 2688 bp 56.03 4.39 77.12
qh_9_scaffold_25518 3 1025 bp 51.80 4.39 78.44
qh_9_scaffold_19755
Species: Halogranum salarium (100%)
1 1229 bp 42.39 4.39 76.16
qh_9_scaffold_17718
Species: Haloquadratum walsbyi (50%)
2 1322 bp 46.22 4.39 64.67
qh_9_scaffold_24741 4 1048 bp 51.34 4.39 91.89
qh_9_scaffold_22150
Species: Haloferax mediterranei (50%)
2 1137 bp 48.90 4.40 88.13
qh_9_scaffold_7823 5 2204 bp 38.57 4.40 42.88
qh_9_scaffold_18727 3 1274 bp 45.76 4.40 89.72
qh_9_scaffold_24081 2 1069 bp 54.91 4.40 55.00
qh_9_scaffold_25581
Species: marine sediment metagenome (50%)
2 1023 bp 51.12 4.40 84.16
qh_9_scaffold_17368 3 1339 bp 47.65 4.41 104.85
qh_9_scaffold_22193 1 1135 bp 52.86 4.41 24.05
qh_9_scaffold_9740 3 1927 bp 36.48 4.41 93.57
qh_9_scaffold_9531
Species: R_Chlamydiae_49_12 (100%)
1 1950 bp 52.46 4.41 42.92
qh_9_scaffold_24218 2 1065 bp 50.33 4.41 79.72
qh_9_scaffold_25634 2 1021 bp 53.09 4.41 67.87
qh_9_scaffold_21027 3 1178 bp 42.78 4.41 95.76
qh_9_scaffold_13539
Order: Natrialbales (50%)
4 2396 bp 50.63 4.42 47.58
qh_9_scaffold_22272 3 1132 bp 52.56 4.42 74.47
qh_9_scaffold_9385 3 1970 bp 42.34 4.42 89.85
qh_9_scaffold_17038 1 1356 bp 59.59 4.42 77.21
qh_9_scaffold_15406 1 1447 bp 42.71 4.42 73.60
qh_9_scaffold_20575 1 1197 bp 44.28 4.43 45.36
qh_9_scaffold_11832 2 1716 bp 49.53 4.43 65.91
qh_9_scaffold_21115 2 1175 bp 57.96 4.43 78.64
qh_9_scaffold_9821
Species: Salinibacter ruber (100%)
3 1920 bp 61.61 4.43 68.91
qh_9_scaffold_25823 2 1016 bp 51.48 4.43 33.07
qh_9_scaffold_37049 2 1308 bp 52.68 4.43 93.12
qh_9_scaffold_18439 1 1286 bp 45.41 4.43 64.62
qh_9_scaffold_22457 3 1126 bp 39.43 4.44 67.67
qh_9_scaffold_15142 3 1465 bp 34.33 4.44 52.22
qh_9_scaffold_19511
Species: Peptococcaceae bacterium BRH_c4a (50%)
2 1239 bp 37.77 4.44 90.80
qh_9_scaffold_16287
Species: Natrinema pellirubrum (50%)
2 1395 bp 38.28 4.44 94.62
qh_9_scaffold_20983 5 1847 bp 39.36 4.44 86.25
qh_9_scaffold_8970 6 2770 bp 36.10 4.44 94.01
qh_9_scaffold_10435
Species: Vibrio ezurae (50%)
2 1848 bp 44.48 4.44 74.03
qh_9_scaffold_17563 1 1329 bp 51.99 4.44 14.00
qh_9_scaffold_21294 1 1168 bp 59.25 4.45 25.43
qh_9_scaffold_4413 6 3077 bp 34.38 4.45 92.43
qh_9_scaffold_23141 2 1101 bp 35.24 4.45 97.28
qh_9_scaffold_15960 3 1412 bp 34.07 4.46 89.24
qh_9_scaffold_21960
Species: Anabaena sp. 90 (50%)
2 1144 bp 39.42 4.46 101.75
qh_9_scaffold_43922 2 1233 bp 55.56 4.46 61.80
qh_9_scaffold_15929
Species: Methanosarcina mazei (50%)
2 1414 bp 42.64 4.46 99.93
qh_9_scaffold_30874
Species: Guillardia theta (50%)
2 1590 bp 54.40 4.47 84.34
qh_9_scaffold_17369 5 1964 bp 33.81 4.48 83.25
qh_9_scaffold_15331
Species: Salinarchaeum sp. Harcht-Bsk1 (100%)
1 1452 bp 55.58 4.48 95.45
qh_9_scaffold_13709 3 1561 bp 56.69 4.48 64.77
qh_9_scaffold_14687
Species: Halobacterium salinarum (50%)
2 1494 bp 47.72 4.48 90.56
Displaying items 251-300 of 22383 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.