ggKbase home page

qh_10_scaffold_2134

Search features with annotation key words

Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qh_10_scaffold_2134_1
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(3..356)
-----------------
DNA (354bp)
protein (118aa)
Type II/IV secretion system ATPase protein n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XNP3_NATM8
type II/IV secretion system ATPase protein
Type II/IV secretion system ATPase protein {ECO:0000313|EMBL:CCQ35555.1}; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natrono
qh_10_scaffold_2134_2

Not on your lists

comp(458..1168)
-----------------
DNA (711bp)
protein (237aa)
Uncharacterized protein n=1 Tax=Haloferax mediterranei (strain ATCC 33500 / DSM 1411 / JCM 8866 / NBRC 14739 / NCIMB 2177 / R-4) RepID=I3R3D9_HALMT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEN05140.1}; TaxID=756883 species="Archaea.;" source="halophilic archaeon DL31.;"
qh_10_scaffold_2134_3
Halalkalicoccus jeotgali, Halalkalicoccus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

1305..1760
-----------------
DNA (456bp)
protein (152aa)
Uncharacterized protein n=1 Tax=Halalkalicoccus jeotgali (strain DSM 18796 / CECT 7217 / JCM 14584 / KCTC 4019 / B3) RepID=D8J4X5_HALJB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADJ15592.1}; TaxID=795797 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halalkalicoccus.;" source="Halalkalicoccus jeotgal
qh_10_scaffold_2134_4
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(1871..2569)
-----------------
DNA (699bp)
protein (233aa)
DNA binding protein n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0N480_9EURY
DNA binding protein {ECO:0000313|EMBL:EMA51914.1}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus thailandensis JCM 13
Bacterio-opsin activator HTH domain protein
qh_10_scaffold_2134_5
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

2657..2959
-----------------
DNA (303bp)
protein (101aa)
Uncharacterized protein n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3INY9_NATPD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAI50163.2}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas pharaonis (st
qh_10_scaffold_2134_6
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

3311..3820
-----------------
DNA (510bp)
protein (170aa)
gch3; GTP cyclohydrolase III (EC:3.5.4.29)
GTP cyclohydrolase III {ECO:0000255|HAMAP-Rule:MF_00608}; EC=3.5.4.29 {ECO:0000255|HAMAP-Rule:MF_00608};; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae;
GTP cyclohydrolase III n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=GCH3_NATPD
qh_10_scaffold_2134_7
halophilic archaeon J07HX5, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

3901..4674
-----------------
DNA (774bp)
protein (258aa)
hypothetical protein id=24654768 bin=uncultured_archaeon_J07HX5 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=uncultured_archaeon_J07HX5
Uncharacterized protein {ECO:0000313|EMBL:ERG89715.1}; TaxID=1325472 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX5.;"
hypothetical protein
qh_10_scaffold_2134_8
halophilic archaeon J07HB67, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

4826..5293
-----------------
DNA (468bp)
protein (156aa)
ABC-type branched-chain amino acid transport system, periplasmic component n=1 Tax=halophilic archaeon J07HB67 RepID=U1R072_9EURY
ABC-type branched-chain amino acid transport system, periplasmic component {ECO:0000313|EMBL:ERH13063.1}; TaxID=1085029 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="haloph
amino acid/amide ABC transporter substrate-binding protein, haat family
qh_10_scaffold_2134_9
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

5290..6036
-----------------
DNA (747bp)
protein (249aa)
ABC-type transport system periplasmic substrate-binding protein (Probable substrate branched-chain amino acids) n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XQY1_NATM8
livJ1; ABC-type transport system periplasmic substrate-binding protein (probable substrate branched-chain amino acids)
ABC-type transport system periplasmic substrate-binding protein (Probable substrate branched-chain amino acids) {ECO:0000313|EMBL:CCQ36589.1}; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteri
qh_10_scaffold_2134_10
Halogeometricum borinquense, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(6148..6927)
-----------------
DNA (780bp)
protein (260aa)
ABC transporter n=1 Tax=Halogeometricum borinquense (strain ATCC 700274 / DSM 11551 / JCM 10706 / PR3) RepID=E4NRS0_HALBP
branched-chain amino acid ABC transporter ATPase
ABC transporter {ECO:0000313|EMBL:ELY30365.1}; ABC-type branched-chain amino acid transport system, ATPase component {ECO:0000313|EMBL:ADQ66857.1}; TaxID=469382 species="Archaea; Euryarchaeota; Haloba
qh_10_scaffold_2134_11
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(6924..7829)
-----------------
DNA (906bp)
protein (302aa)
ABC-type transport system ATP-binding protein (Probable substrate branched-chain amino acids) n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XR21_NATM8
livG1; ABC-type transport system ATP-binding protein (probable substrate branched-chain amino acids)
ABC-type transport system ATP-binding protein (Probable substrate branched-chain amino acids) {ECO:0000313|EMBL:CCQ36591.1}; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales
qh_10_scaffold_2134_12
Haloferax mucosum, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(7822..9180)
-----------------
DNA (1359bp)
protein (453aa)
ABC-type branched-chain amino acid transport system, permease protein II n=1 Tax=Haloferax mucosum ATCC BAA-1512 RepID=M0IBR0_9EURY
ABC-type branched-chain amino acid transport system, permease protein II {ECO:0000313|EMBL:ELZ94230.1}; TaxID=662479 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halof
livM; ABC-type branched-chain amino acid transport system, permease protein II
qh_10_scaffold_2134_13
halophilic archaeon J07HB67, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(9177..10331)
-----------------
DNA (1155bp)
protein (385aa)
Branched-chain amino acid ABC-type transport system, permease component n=1 Tax=halophilic archaeon J07HB67 RepID=U1PQN7_9EURY
Branched-chain amino acid ABC-type transport system, permease component {ECO:0000313|EMBL:ERH12751.1}; TaxID=1085029 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophili
amino acid/amide ABC transporter membrane protein 1, haat family
Displaying 13 items

View Taxonomy