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qh_10_scaffold_5162

Search features with annotation key words

Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qh_10_scaffold_5162_1
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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comp(1..216)
-----------------
DNA (216bp)
protein (72aa)
Uncharacterized protein n=1 Tax=Salinibacter ruber (strain M8) RepID=D5HC39_SALRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBH25594.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
qh_10_scaffold_5162_2
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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comp(272..1024)
-----------------
DNA (753bp)
protein (251aa)
Phosphate-transporting ATPase {ECO:0000313|EMBL:CBH25595.1}; EC=3.6.3.27 {ECO:0000313|EMBL:CBH25595.1};; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothe
pstB; phosphate-transporting ATPase
proV; choline transporter id=24658398 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
qh_10_scaffold_5162_3
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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comp(1034..1495)
-----------------
DNA (462bp)
protein (154aa)
Uncharacterized protein n=1 Tax=Salinibacter ruber (strain M8) RepID=D5HC41_SALRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBH25596.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
qh_10_scaffold_5162_4
Salinisphaera hydrothermalis, Salinisphaera, Salinisphaerales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1559..1864)
-----------------
DNA (306bp)
protein (102aa)
PadR-like family transcriptional regulator {ECO:0000313|EMBL:KEZ76025.1}; TaxID=1304275 species="Bacteria; Proteobacteria; Gammaproteobacteria; Salinisphaerales; Salinisphaeraceae; Salinisphaera.;" so
Transcriptional regulator, PadR-like family id=3192762 bin=GWF2_Methylomirabilis_70_14 species=Candidatus Desulforudis audaxviator genus=Candidatus Desulforudis taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
PadR family transcriptional regulator
qh_10_scaffold_5162_5
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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comp(2028..2429)
-----------------
DNA (402bp)
protein (134aa)
Putative fluoride ion transporter CrcB n=1 Tax=Salinibacter ruber (strain M8) RepID=D5HC42_SALRM
crcB1; CrcB-like protein
Putative fluoride ion transporter CrcB {ECO:0000256|HAMAP-Rule:MF_00454}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source
qh_10_scaffold_5162_6
unknown

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comp(3049..3174)
-----------------
DNA (126bp)
protein (42aa)

This feature has no annotations

qh_10_scaffold_5162_7
Pontibacter sp. BAB1700, Pontibacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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comp(3231..3620)
-----------------
DNA (390bp)
protein (130aa)
Glyoxalase/bleomycin resistance protein/dioxygenase n=1 Tax=Pontibacter sp. BAB1700 RepID=J1FI56_9BACT
Glyoxalase/bleomycin resistance protein/dioxygenase {ECO:0000313|EMBL:EJF09996.1}; TaxID=1144253 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Pontibacter.;" source="Ponti
glyoxalase
qh_10_scaffold_5162_8
Desulfosporosinus sp. I2, Desulfosporosinus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3737..4525)
-----------------
DNA (789bp)
protein (263aa)
hypothetical protein n=1 Tax=Cohnella laeviribosi RepID=UPI00037C6A8E
RNA polymerase sigma factor SigZ {ECO:0000313|EMBL:KJR47484.1}; TaxID=1617025 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfosporosinus.;" source="Desulfosporosinus s
RNA polymerase, sigma subunit, SigZ
qh_10_scaffold_5162_9
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

4837..5472
-----------------
DNA (636bp)
protein (212aa)
TonB family protein
TonB family C-terminal domain protein {ECO:0000313|EMBL:ABC44656.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Sal
TonB family protein id=24658876 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
qh_10_scaffold_5162_10
unknown

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comp(5305..5643)
-----------------
DNA (339bp)
protein (113aa)

This feature has no annotations

qh_10_scaffold_5162_11
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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comp(5658..5927)
-----------------
DNA (270bp)
protein (90aa)
hypothetical protein
hypothetical protein id=24658875 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Putative membrane protein {ECO:0000313|EMBL:CBH24070.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter ru
qh_10_scaffold_5162_12
unknown

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5984..6475
-----------------
DNA (492bp)
protein (164aa)

This feature has no annotations

qh_10_scaffold_5162_13
unknown

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comp(6558..6872)
-----------------
DNA (315bp)
protein (105aa)

This feature has no annotations

Displaying 13 items

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