ggKbase home page

qh_10_scaffold_224_6

Organism: QH_10_UNK

megabin RP 54 / 55 MC: 52 BSCG 49 / 51 MC: 47 ASCG 38 / 38 MC: 38
Location: comp(2545..3030)

Top 3 Functional Annotations

Value Algorithm Source
30S ribosomal protein S4 n=1 Tax=Clostridium botulinum (strain 657 / Type Ba4) RepID=C3KV39_CLOB6 similarity UNIREF
DB: UNIREF100
  • Identity: 29.1
  • Coverage: 165.0
  • Bit_score: 69
  • Evalue 4.70e-09
rpsD_1; 30S ribosomal protein S4 similarity KEGG
DB: KEGG
  • Identity: 29.1
  • Coverage: 165.0
  • Bit_score: 69
  • Evalue 1.30e-09
Ribosomal protein S4 {ECO:0000313|EMBL:AGH24285.1}; TaxID=1295593 species="Eukaryota; Jakobida; Histionidae; Reclinomonas.;" source="Reclinomonas americana ATCC 50633.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 31.9
  • Coverage: 163.0
  • Bit_score: 69
  • Evalue 6.60e-09

Lists

This feature is not on any list.

Notes

Eukaryote, probably algal Jill Banfield (10/16/14)

Taxonomy

Reclinomonas americana → Reclinomonas → Eukaryota

Sequences

DNA sequence
Length: 486
ATGCAAAAACGGCAAATAAAAGATAAACGAAAAGCAAAACTACATTCATATCTCTTACGTATCTTGCAGCCATCGTGTTTCAATAAAGATGTGCAGCAAATACAAACAACACATGGTGCACCATCTAAAGCTTTTATTGATATAGAGTATAATAAACCTAAGATGAGTGCCAAAGCTTGTGTATTGGATACAATCAAAAGGTTGGAGCGACGCTTGGATACTCTTGTATACAAAGCAGGATTTGCTTCCTCTATCATGTGTGCAAAACAGATGATCAATCATCAACAAGTAAAACTAAACAACATACGTGTGCGTCTGCCTTCTATCCTCTTGCGTCCAGGTGATCTTGTGTATGTAGATCATGTATTACCAGTAAATACGCATGTGGTAAATACGCATGTGTTAGAAGTTGATCATGATACACACACAGCGGTATACCTGTTTCACCCATATCAAGCAGAGTACAGATGTGCGGATATAGATTAA
PROTEIN sequence
Length: 162
MQKRQIKDKRKAKLHSYLLRILQPSCFNKDVQQIQTTHGAPSKAFIDIEYNKPKMSAKACVLDTIKRLERRLDTLVYKAGFASSIMCAKQMINHQQVKLNNIRVRLPSILLRPGDLVYVDHVLPVNTHVVNTHVLEVDHDTHTAVYLFHPYQAEYRCADID*