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QS_1_UNK

In projects: QS_1  |  diaphorachaeota

Metagenomic Context

METAGENOME

Properties

Avg. coverage: 21.56 Longest contig: 171.49 Kbp Bin length: 82.52 Mbp GC content: 62.60 %
Contigs count: 28378 Features count: 107284 rRNAs count: 14 tRNAs count: 997

Genome completeness

megabin RP 48 / 55 MC: 44 BSCG 43 / 51 MC: 36 ASCG 38 / 38 MC: 38
Displaying items 451-500 of 28378 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
qs_1_scaffold_19814
Genus: Natronomonas (50%)
4 1512 bp 68.58 63.49 100.40
qs_1_scaffold_13791
Species: Halococcus salifodinae (100%)
3 2017 bp 70.85 92.17 100.40
qs_1_scaffold_31896
Species: halophilic archaeon J07HX64 (50%)
2 1010 bp 63.66 8.42 100.40
qs_1_scaffold_19722
Species: halophilic archaeon J07HX64 (50%)
2 1518 bp 70.62 44.40 100.40
qs_1_scaffold_31802
Species: Halobacterium sp. DL1 (100%)
2 1013 bp 67.32 8.39 100.40
qs_1_scaffold_31367
Species: Halorubrum lacusprofundi (50%)
2 1025 bp 64.39 9.27 100.39
qs_1_scaffold_15907
Order: Natrialbales (100%)
3 1805 bp 66.26 6.04 100.39
qs_1_scaffold_5699
Class: Halobacteria (80%)
5 4127 bp 60.53 15.53 100.39
qs_1_scaffold_31036
Species: Halorhabdus utahensis (100%)
2 1034 bp 71.95 9.09 100.39
qs_1_scaffold_19135
Species: Haloferax denitrificans (50%)
2 1554 bp 61.78 5.98 100.39
qs_1_scaffold_11804
Species: Haloferax elongans (100%)
2 3108 bp 52.09 5.76 100.39
qs_1_scaffold_15793
Species: Natronomonas moolapensis (100%)
2 1814 bp 67.09 15.77 100.39
qs_1_scaffold_30929
Species: Haloquadratum sp. J07HQX50 (50%)
2 1037 bp 66.83 11.28 100.39
qs_1_scaffold_25534
Species: Candidatus Halobonum tyrrellensis (50%)
4 2594 bp 70.66 10.83 100.39
qs_1_scaffold_30819
Species: Natronococcus occultus (50%)
2 1040 bp 76.63 8.85 100.38
qs_1_scaffold_30620
Species: Haloferax larsenii (50%)
2 1046 bp 68.07 10.33 100.38
qs_1_scaffold_30325
Species: Halococcus saccharolyticus (100%)
2 1055 bp 62.27 57.91 100.38
qs_1_scaffold_30214
Species: Salinibacter ruber (100%)
2 1058 bp 65.41 50.19 100.38
qs_1_scaffold_18590
Species: Salinibacter ruber (66.67%)
3 1593 bp 66.16 42.62 100.38
qs_1_scaffold_23077
Species: Haloarcula californiae (50%)
2 1333 bp 70.29 14.96 100.37
qs_1_scaffold_15060
Species: Natronomonas pharaonis (66.67%)
3 1883 bp 70.26 22.78 100.37
qs_1_scaffold_29584
Species: Halococcus thailandensis (50%)
2 1079 bp 73.03 7.88 100.37
qs_1_scaffold_14842
Class: Halobacteria (66.67%)
3 1904 bp 67.65 7.56 100.37
qs_1_scaffold_29180
Species: uncultured archaeon A07HR60 (50%)
2 1091 bp 71.31 6.97 100.37
qs_1_scaffold_22293 4 1369 bp 54.13 8.18 100.37
qs_1_scaffold_28965
Species: Candidatus Nitrospira defluvii (50%)
2 1097 bp 63.90 6.75 100.37
qs_1_scaffold_10556
Species: Natronomonas pharaonis (80%)
5 2469 bp 68.65 39.29 100.37
qs_1_scaffold_12292
Species: halophilic archaeon J07HB67 (50%)
2 2197 bp 71.37 10.65 100.36
qs_1_scaffold_6177
Order: Halobacteriales (50%)
4 3593 bp 73.89 15.45 100.36
qs_1_scaffold_12135
Order: Natrialbales (66.67%)
3 2218 bp 68.12 13.48 100.36
qs_1_scaffold_28548
Species: Halostagnicola sp. A56 (50%)
2 1112 bp 62.23 15.02 100.36
qs_1_scaffold_17431
Genus: Halorhabdus (50%)
4 1674 bp 61.77 7.59 100.36
qs_1_scaffold_17398
Species: Halococcus saccharolyticus (50%)
2 1677 bp 66.85 74.78 100.36
qs_1_scaffold_28261
Species: Halococcus hamelinensis (50%)
2 1121 bp 59.23 55.58 100.36
qs_1_scaffold_11862
Species: Halogeometricum borinquense (100%)
2 2257 bp 70.36 11.56 100.35
qs_1_scaffold_27574
Species: Halomicrobium mukohataei (50%)
2 1145 bp 66.72 15.90 100.35
qs_1_scaffold_20908
Species: Halorubrum californiense (50%)
2 1444 bp 72.16 20.50 100.35
qs_1_scaffold_27138
Species: Halarchaeum acidiphilum (50%)
2 1160 bp 65.78 10.60 100.35
qs_1_scaffold_20757
Order: Natrialbales (66.67%)
3 1453 bp 73.50 10.46 100.34
qs_1_scaffold_6216
Species: Natronomonas pharaonis (66.67%)
3 4072 bp 67.44 22.67 100.34
qs_1_scaffold_13608
Species: Halococcus morrhuae (50%)
2 2039 bp 61.30 66.31 100.34
qs_1_scaffold_48269
Species: Haloquadratum walsbyi (100%)
2 1166 bp 65.44 8.75 100.34
qs_1_scaffold_14312
Genus: Natronomonas (50%)
4 2332 bp 71.87 45.07 100.34
qs_1_scaffold_20636
Species: Haloarcula vallismortis (66.67%)
3 1459 bp 71.97 8.16 100.34
qs_1_scaffold_26756
Species: Candidatus Halobonum tyrrellensis (50%)
2 1175 bp 56.51 5.62 100.34
qs_1_scaffold_26523
Species: Haloquadratum walsbyi (50%)
2 1184 bp 54.65 6.59 100.34
qs_1_scaffold_27705
Species: Haloterrigena salina (66.67%)
3 2078 bp 69.59 7.56 100.34
qs_1_scaffold_16121
Domain: Archaea (100%)
3 1782 bp 60.38 7.13 100.34
qs_1_scaffold_20163
Species: Halococcus hamelinensis (50%)
2 1489 bp 61.79 6.18 100.34
qs_1_scaffold_16064
Species: Halobacterium sp. DL1 (100%)
2 1788 bp 63.03 13.37 100.34
Displaying items 451-500 of 28378 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.