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QS_1_UNK

In projects: QS_1  |  diaphorachaeota

Metagenomic Context

METAGENOME

Properties

Avg. coverage: 21.56 Longest contig: 171.49 Kbp Bin length: 82.52 Mbp GC content: 62.60 %
Contigs count: 28378 Features count: 107284 rRNAs count: 14 tRNAs count: 997

Genome completeness

megabin RP 48 / 55 MC: 44 BSCG 43 / 51 MC: 36 ASCG 38 / 38 MC: 38
Displaying items 501-550 of 28378 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
qs_1_scaffold_19746
Order: Haloferacales (66.67%)
3 1516 bp 67.81 8.05 100.33
qs_1_scaffold_25772 2 1214 bp 47.28 5.68 100.33
qs_1_scaffold_15573
Species: Candidatus Halobonum tyrrellensis (50%)
2 1833 bp 56.30 7.26 100.33
qs_1_scaffold_14416
Species: Raphidiopsis brookii (100%)
2 2452 bp 44.90 4.77 100.33
qs_1_scaffold_25402
Species: Natronomonas moolapensis (100%)
2 1229 bp 66.72 16.27 100.33
qs_1_scaffold_25259
Species: Salinibacter ruber (100%)
2 1235 bp 66.88 68.18 100.32
qs_1_scaffold_24194 3 1857 bp 65.27 4.90 100.32
qs_1_scaffold_25935
Species: Salinarchaeum sp. Harcht-Bsk1 (66.67%)
3 2479 bp 66.56 10.25 100.32
qs_1_scaffold_25107
Species: Halorubrum distributum (50%)
2 1241 bp 57.61 4.67 100.32
qs_1_scaffold_15252
Species: Halogeometricum pallidum (50%)
4 1866 bp 64.20 7.02 100.32
qs_1_scaffold_12420
Species: Natronomonas pharaonis (100%)
3 2180 bp 68.99 27.20 100.32
qs_1_scaffold_15182
Class: Halobacteria (100%)
3 1872 bp 75.80 11.70 100.32
qs_1_scaffold_15193
Species: Haloquadratum walsbyi (100%)
2 1872 bp 52.35 10.58 100.32
qs_1_scaffold_12303
Species: Halorubrum coriense (50%)
2 2195 bp 67.97 12.44 100.32
qs_1_scaffold_10332
Species: Halosimplex carlsbadense (66.67%)
3 2509 bp 76.17 12.91 100.32
qs_1_scaffold_24680
Species: Halorhabdus tiamatea (100%)
2 1259 bp 73.15 7.23 100.32
qs_1_scaffold_18750
Species: Salinibacter ruber (100%)
2 1582 bp 69.91 22.38 100.32
qs_1_scaffold_24447
Species: Cyanothece sp. PCC 7425 (50%)
2 1268 bp 61.67 5.68 100.32
qs_1_scaffold_18613
Genus: Halococcus (66.67%)
3 1591 bp 65.62 41.67 100.31
qs_1_scaffold_18535
Class: Halobacteria (66.67%)
3 1597 bp 65.44 10.46 100.31
qs_1_scaffold_24183
Species: halophilic archaeon J07HX64 (50%)
2 1280 bp 68.91 13.20 100.31
qs_1_scaffold_22557
Order: Halobacteriales (66.67%)
3 1929 bp 69.00 38.98 100.31
qs_1_scaffold_24048
Species: Natrinema sp. J7-2 (50%)
2 1286 bp 63.84 38.65 100.31
qs_1_scaffold_6312
Order: Halobacteriales (50%)
4 3538 bp 64.25 26.60 100.31
qs_1_scaffold_23863
Species: Salinibacter ruber (100%)
2 1295 bp 66.95 51.27 100.31
qs_1_scaffold_23713
Species: Natrialba hulunbeirensis (50%)
2 1301 bp 75.63 9.15 100.31
qs_1_scaffold_23575
Species: RBG_19FT_COMBO_Chloroflexi_47_15_curated (50%)
2 1307 bp 67.64 14.61 100.31
qs_1_scaffold_14219
Order: Halobacteriales (50%)
4 1971 bp 66.01 17.50 100.30
qs_1_scaffold_37105
Species: Natronomonas pharaonis (50%)
2 1319 bp 75.28 25.63 100.30
qs_1_scaffold_9564
Order: Halobacteriales (66.67%)
3 2641 bp 61.45 6.82 100.30
qs_1_scaffold_23111
Species: Halosimplex carlsbadense (100%)
2 1328 bp 72.59 12.05 100.30
qs_1_scaffold_4125
Species: Halococcus hamelinensis (100%)
3 4666 bp 55.64 7.72 100.30
qs_1_scaffold_22994
Species: Halomicrobium mukohataei (50%)
2 1334 bp 74.29 17.69 100.30
qs_1_scaffold_23002
Species: Haladaptatus paucihalophilus (50%)
2 1334 bp 72.64 18.82 100.30
qs_1_scaffold_41932
Species: Haloterrigena salina (50%)
2 1334 bp 64.84 59.52 100.30
qs_1_scaffold_22824
Species: Haloferax denitrificans (50%)
2 1343 bp 68.43 10.05 100.30
qs_1_scaffold_31990
Species: Haloferax sp. ATCC BAA-646 (50%)
2 1008 bp 64.09 21.13 100.30
qs_1_scaffold_31879
Species: Halococcus salifodinae (50%)
2 1011 bp 72.90 9.30 100.30
qs_1_scaffold_22574
Species: Haloferax sulfurifontis (50%)
2 1355 bp 69.89 8.71 100.30
qs_1_scaffold_31673
Species: Halococcus morrhuae (50%)
2 1017 bp 69.32 11.50 100.30
qs_1_scaffold_13559
Species: Halosimplex carlsbadense (75%)
4 2046 bp 70.48 17.25 100.29
qs_1_scaffold_31420
Species: Halomicrobium mukohataei (50%)
2 1023 bp 70.28 6.45 100.29
qs_1_scaffold_31431
Species: Halococcus saccharolyticus (50%)
2 1023 bp 69.11 45.45 100.29
qs_1_scaffold_31316
Species: halophilic archaeon DL31 (100%)
2 1026 bp 56.92 6.14 100.29
qs_1_scaffold_31320
Species: halophilic archaeon DL31 (50%)
2 1026 bp 65.98 15.69 100.29
qs_1_scaffold_31187
Species: Halococcus thailandensis (50%)
2 1029 bp 67.83 34.31 100.29
qs_1_scaffold_9053
Species: Halorhabdus tiamatea (50%)
2 2752 bp 66.35 24.85 100.29
qs_1_scaffold_16852
Species: Salinarchaeum sp. Harcht-Bsk1 (100%)
2 1723 bp 53.80 7.43 100.29
qs_1_scaffold_31003
Species: Gordonia rhizosphera (50%)
2 1035 bp 77.87 8.41 100.29
qs_1_scaffold_30901
Species: Halogranum salarium (50%)
2 1038 bp 68.88 7.13 100.29
Displaying items 501-550 of 28378 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.