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QS_2_UNK

In projects: QS_2  |  diaphorachaeota

Metagenomic Context

METAGENOME

Properties

Avg. coverage: 27.84 Longest contig: 286.04 Kbp Bin length: 41.26 Mbp GC content: 59.97 %
Contigs count: 14256 Features count: 54073 rRNAs count: 12 tRNAs count: 473

Genome completeness

megabin RP 47 / 55 MC: 37 BSCG 45 / 51 MC: 38 ASCG 38 / 38 MC: 38
Displaying items 651-700 of 14256 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
qs_2_scaffold_3072
Class: Halobacteria (50%)
10 5813 bp 60.45 10.37 76.12
qs_2_scaffold_5822 10 6355 bp 49.54 9.57 85.35
qs_2_scaffold_1128 10 8179 bp 57.55 7.36 76.59
qs_2_scaffold_606 10 10554 bp 56.20 7.31 87.27
qs_2_scaffold_1313 10 6650 bp 57.13 7.58 88.15
qs_2_scaffold_1198
Class: Halobacteria (50%)
10 7139 bp 55.33 15.56 81.23
qs_2_scaffold_2120 10 5737 bp 56.65 6.94 84.40
qs_2_scaffold_1291 10 7701 bp 53.81 8.13 62.49
qs_2_scaffold_1729 10 6677 bp 56.48 6.29 69.46
qs_2_scaffold_1130
Genus: Halococcus (60%)
10 7356 bp 62.13 16.34 78.72
qs_2_scaffold_2899 10 5741 bp 54.43 7.11 61.61
qs_2_scaffold_5847 10 4700 bp 47.74 7.62 75.19
qs_2_scaffold_1108 10 7444 bp 55.59 7.75 78.47
qs_2_scaffold_862 10 9733 bp 54.89 7.28 66.55
qs_2_scaffold_2011
Species: Halococcus saccharolyticus (50%)
10 5113 bp 60.61 23.86 84.67
qs_2_scaffold_241
Domain: Bacteria (60%)
10 17959 bp 59.37 11.21 93.85
qs_2_scaffold_793
Species: Haloterrigena salina (80%)
10 9050 bp 59.69 10.24 96.86
qs_2_scaffold_2907
Class: Halobacteria (60%)
10 6563 bp 58.57 65.76 80.13
qs_2_scaffold_494
Domain: Bacteria (50%)
10 11844 bp 60.20 9.46 82.47
qs_2_scaffold_1224 10 8099 bp 51.33 7.07 70.64
qs_2_scaffold_2269 10 4770 bp 53.50 7.46 71.59
qs_2_scaffold_6325 10 6289 bp 60.58 9.49 69.41
qs_2_scaffold_1017
Class: Halobacteria (80%)
10 7834 bp 59.29 32.90 77.85
qs_2_scaffold_3792
Class: Halobacteria (70%)
10 7152 bp 59.33 46.60 76.05
qs_2_scaffold_7017
Class: Halobacteria (80%)
10 4664 bp 65.03 82.72 75.96
qs_2_scaffold_633
Order: Natrialbales (50%)
10 10749 bp 58.22 13.68 89.62
qs_2_scaffold_2734 10 7753 bp 52.86 6.71 68.45
qs_2_scaffold_541
Domain: Bacteria (70%)
10 11250 bp 63.33 20.52 85.39
qs_2_scaffold_749 10 9279 bp 42.46 7.94 48.56
qs_2_scaffold_3125 10 3829 bp 61.14 7.05 74.43
qs_2_scaffold_1792 10 8745 bp 54.74 7.02 70.84
qs_2_scaffold_5421
Order: Halobacteriales (70%)
10 8040 bp 66.70 108.45 73.28
qs_2_scaffold_7958 10 3419 bp 55.34 6.43 69.58
qs_2_scaffold_2581 10 5107 bp 65.79 12.69 98.86
qs_2_scaffold_819 10 8909 bp 56.84 7.41 78.49
qs_2_scaffold_1910
Class: Halobacteria (70%)
10 9580 bp 54.70 24.56 72.33
qs_2_scaffold_658
Species: Halogeometricum pallidum (70%)
10 13244 bp 58.11 20.99 77.45
qs_2_scaffold_2150 10 4909 bp 55.31 7.66 75.17
qs_2_scaffold_589
Order: Halobacteriales (60%)
10 13749 bp 51.76 21.59 85.42
qs_2_scaffold_1135 10 7338 bp 57.41 7.03 77.47
qs_2_scaffold_1913 10 6888 bp 56.36 6.95 87.20
qs_2_scaffold_2287 10 6257 bp 54.95 7.13 83.76
qs_2_scaffold_2756
Class: Halobacteria (50%)
10 4167 bp 60.50 19.29 69.47
qs_2_scaffold_7742
Order: Halobacteriales (50%)
10 4109 bp 59.55 61.26 83.16
qs_2_scaffold_8808 10 3289 bp 65.40 13.38 88.39
qs_2_scaffold_1297
Class: Halobacteria (90%)
10 7058 bp 63.08 40.20 66.39
qs_2_scaffold_613
Species: Halorubrum lacusprofundi (70%)
10 10485 bp 60.02 28.15 91.96
qs_2_scaffold_1067 10 7587 bp 53.24 6.96 73.55
qs_2_scaffold_9800
Class: Halobacteria (70%)
10 6252 bp 69.99 99.39 72.65
qs_2_scaffold_1528
Species: uncultured archaeon A07HR67 (50%)
10 6079 bp 55.70 8.21 94.56
Displaying items 651-700 of 14256 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.