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qs_3_scaffold_35

Search features with annotation key words

Displaying items 31-60 of 91 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qs_3_scaffold_35_trna_25
unknown

Not on your lists

comp(19189..19260)
-----------------
DNA (72bp)
transferRNA
qs_3_scaffold_35_trna_24
unknown

Not on your lists

comp(19285..19357)
-----------------
DNA (73bp)
transferRNA
qs_3_scaffold_35_trna_23
unknown

Not on your lists

comp(19386..19468)
-----------------
DNA (83bp)
transferRNA
qs_3_scaffold_35_trna_22
unknown

Not on your lists

comp(19529..19602)
-----------------
DNA (74bp)
transferRNA
qs_3_scaffold_35_trna_21
unknown

Not on your lists

comp(19618..19689)
-----------------
DNA (72bp)
transferRNA
qs_3_scaffold_35_22
Oscillatoria nigro-viridis, Oscillatoria, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(19829..20074)
-----------------
DNA (246bp)
protein (82aa)
Photosystem I iron-sulfur center {ECO:0000256|HAMAP-Rule:MF_01303}; EC=1.97.1.12 {ECO:0000256|HAMAP-Rule:MF_01303};; 9 kDa polypeptide {ECO:0000256|HAMAP-Rule:MF_01303}; PSI-C {ECO:0000256|HAMAP-Rule:
Photosystem I iron-sulfur center n=1 Tax=Oscillatoria nigro-viridis PCC 7112 RepID=K9VGP1_9CYAN
Photosystem I iron-sulfur center
qs_3_scaffold_35_23
Monomastix sp. OKE-1, Monomastix, Monomastigales, Mamiellophyceae, Chlorophyta, Viridiplantae

Not on your lists

comp(20121..20636)
-----------------
DNA (516bp)
protein (172aa)
Photosystem I assembly protein Ycf3 n=1 Tax=Monomastix sp. (strain OKE-1) RepID=C0JWJ5_MONSK
Photosystem I assembly protein Ycf3 {ECO:0000256|HAMAP-Rule:MF_00439}; TaxID=141716 species="Eukaryota; Viridiplantae; Chlorophyta; prasinophytes; Mamiellophyceae; Monomastigales; Monomastigaceae; Mon
ycf3; photosystem I assembly protein Ycf3
qs_3_scaffold_35_trna_20
unknown

Not on your lists

comp(20681..20751)
-----------------
DNA (71bp)
transferRNA
qs_3_scaffold_35_24
Coccomyxa subellipsoidea, Coccomyxa, Trebouxiophyceae, Chlorophyta, Viridiplantae

Not on your lists

comp(20956..21438)
-----------------
DNA (483bp)
protein (161aa)
Cytochrome b6-f complex subunit 4 n=1 Tax=Coccomyxa subellipsoidea C-169 RepID=E9NPX6_9CHLO
Cytochrome b6-f complex subunit 4 {ECO:0000256|HAMAP-Rule:MF_01344}; 17 kDa polypeptide {ECO:0000256|HAMAP-Rule:MF_01344}; TaxID=574566 species="Eukaryota; Viridiplantae; Chlorophyta; Trebouxiophyceae
Cytochrome b6-f complex subunit 4
qs_3_scaffold_35_25
Ostreococcus tauri, Ostreococcus, Mamiellales, Mamiellophyceae, Chlorophyta, Viridiplantae

Not on your lists

comp(21495..22142)
-----------------
DNA (648bp)
protein (216aa)
Cytochrome b6 n=2 Tax=Ostreococcus tauri RepID=CYB6_OSTTA
Cytochrome b6 {ECO:0000255|HAMAP-Rule:MF_00633}; TaxID=70448 species="Eukaryota; Viridiplantae; Chlorophyta; prasinophytes; Mamiellophyceae; Mamiellales; Bathycoccaceae; Ostreococcus.;" source="Ostreo
cytochrome b subunit of the bc complex
qs_3_scaffold_35_26
Ostreococcus tauri, Ostreococcus, Mamiellales, Mamiellophyceae, Chlorophyta, Viridiplantae

Not on your lists

22416..23216
-----------------
DNA (801bp)
protein (267aa)
Site-determining protein (Fragment) n=1 Tax=Ostreococcus tauri RepID=Q01DV1_OSTTA
Site-determining protein {ECO:0000256|PIRNR:PIRNR003092}; TaxID=70448 species="Eukaryota; Viridiplantae; Chlorophyta; prasinophytes; Mamiellophyceae; Mamiellales; Bathycoccaceae; Ostreococcus.;" sourc
septum site-determining protein MinD
qs_3_scaffold_35_27
unknown

Not on your lists

23236..23364
-----------------
DNA (129bp)
protein (43aa)

This feature has no annotations

qs_3_scaffold_35_trna_19
unknown

Not on your lists

comp(23313..23399)
-----------------
DNA (87bp)
transferRNA
qs_3_scaffold_35_trna_18
unknown

Not on your lists

comp(23452..23532)
-----------------
DNA (81bp)
transferRNA
qs_3_scaffold_35_28
Bathycoccus prasinos, Bathycoccus, Mamiellales, Mamiellophyceae, Chlorophyta, Viridiplantae

Not on your lists

comp(23576..24961)
-----------------
DNA (1386bp)
protein (462aa)
Photosystem II CP43 protein n=1 Tax=Bathycoccus prasinos RepID=K8FE46_9CHLO
Photosystem II CP43 reaction center protein {ECO:0000256|HAMAP-Rule:MF_01496, ECO:0000256|RuleBase:RU004533}; PSII 43 kDa protein {ECO:0000256|HAMAP-Rule:MF_01496}; Protein CP-43 {ECO:0000256|HAMAP-Ru
photosystem II 44 kDa subunit reaction center protein
qs_3_scaffold_35_29
Micromonas sp. RCC299, Micromonas, Mamiellales, Mamiellophyceae, Chlorophyta, Viridiplantae

Not on your lists

comp(24945..26003)
-----------------
DNA (1059bp)
protein (353aa)
Photosystem II D2 protein {ECO:0000256|HAMAP-Rule:MF_01383, ECO:0000256|RuleBase:RU004333}; Short=PSII D2 protein {ECO:0000256|HAMAP-Rule:MF_01383};; EC=1.10.3.9 {ECO:0000256|HAMAP-Rule:MF_01383};; Ph
Photosystem II D2 protein n=1 Tax=Micromonas sp. (strain RCC299 / NOUM17) RepID=C1KR26_MICSR
Photosystem II DII subunit, Q(A) protein
qs_3_scaffold_35_30
Chlorokybus atmophyticus, Chlorokybus, Chlorokybales, Chlorokybophyceae, Streptophyta, Viridiplantae

Not on your lists

comp(26533..28776)
-----------------
DNA (2244bp)
protein (748aa)
Photosystem I P700 chlorophyll a apoprotein A2 {ECO:0000255|HAMAP-Rule:MF_00482}; EC=1.97.1.12 {ECO:0000255|HAMAP-Rule:MF_00482};; PSI-B {ECO:0000255|HAMAP-Rule:MF_00482}; PsaB {ECO:0000255|HAMAP-Rule
Photosystem I P700 chlorophyll a apoprotein A2 n=1 Tax=Chlorokybus atmophyticus RepID=PSAB_CHLAT
photosystem I core protein PsaB
qs_3_scaffold_35_31
Trebouxiophyceae sp. MX-AZ01, Trebouxiophyceae, Chlorophyta, Viridiplantae

Not on your lists

comp(28809..31061)
-----------------
DNA (2253bp)
protein (751aa)
Photosystem I P700 chlorophyll a apoprotein A1 {ECO:0000256|HAMAP-Rule:MF_00458}; EC=1.97.1.12 {ECO:0000256|HAMAP-Rule:MF_00458};; PSI-A {ECO:0000256|HAMAP-Rule:MF_00458}; PsaA {ECO:0000256|HAMAP-Rule
Photosystem I P700 chlorophyll a apoprotein A1 n=1 Tax=Trebouxiophyceae sp. MX-AZ01 RepID=J7K6S9_9CHLO
photosystem I core protein PsaA
qs_3_scaffold_35_32
unknown

Not on your lists

comp(31192..31668)
-----------------
DNA (477bp)
protein (159aa)

This feature has no annotations

qs_3_scaffold_35_trna_9
unknown

Not on your lists

31716..31789
-----------------
DNA (74bp)
transferRNA
qs_3_scaffold_35_33
Ostreococcus tauri, Ostreococcus, Mamiellales, Mamiellophyceae, Chlorophyta, Viridiplantae

Not on your lists


32135..32389
-----------------
DNA (255bp)
protein (85aa)
50S ribosomal protein L20, chloroplastic n=2 Tax=Ostreococcus tauri RepID=RK20_OSTTA
50S ribosomal protein L20, chloroplastic {ECO:0000255|HAMAP-Rule:MF_00382}; TaxID=70448 species="Eukaryota; Viridiplantae; Chlorophyta; prasinophytes; Mamiellophyceae; Mamiellales; Bathycoccaceae; Ost
rplT; 50S ribosomal protein L20
qs_3_scaffold_35_34
Microcystis aeruginosa, Microcystis, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists


32570..32872
-----------------
DNA (303bp)
protein (101aa)
30S ribosomal protein S14 n=2 Tax=Microcystis aeruginosa RepID=RS14_MICAN
rpsN; 30S ribosomal protein S14
SSU ribosomal protein S14p (S29e), SSU ribosomal protein S14p (S29e), zinc-independent {ECO:0000313|EMBL:AKE64049.1}; TaxID=1641812 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcal
qs_3_scaffold_35_trna_17
unknown

Not on your lists

comp(32964..33034)
-----------------
DNA (71bp)
transferRNA
qs_3_scaffold_35_35
Pseudanabaena sp. PCC 7367, Pseudanabaena, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

33336..36692
-----------------
DNA (3357bp)
protein (1119aa)
DNA-directed RNA polymerase subunit beta (EC:2.7.7.6)
DNA-directed RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Short=RNAP subunit beta {ECO:0000256|HAMAP-Rule:MF_01321};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01321};; RNA polymerase su
DNA-directed RNA polymerase subunit beta n=1 Tax=Pseudanabaena sp. PCC 7367 RepID=K9SF55_9CYAN
qs_3_scaffold_35_36
Mesostigma viride, Mesostigma, Mesostigmatales, Mesostigmatophyceae, Streptophyta, Viridiplantae

Not on your lists

36795..38057
-----------------
DNA (1263bp)
protein (421aa)
DNA-directed RNA polymerase subunit beta {ECO:0000255|HAMAP-Rule:MF_01321}; EC=2.7.7.6 {ECO:0000255|HAMAP-Rule:MF_01321};; PEP {ECO:0000255|HAMAP-Rule:MF_01321}; Plastid-encoded RNA polymerase subunit
DNA-directed RNA polymerase subunit beta (EC:2.7.7.6)
DNA-directed RNA polymerase subunit beta n=1 Tax=Mesostigma viride RepID=RPOB_MESVI
qs_3_scaffold_35_37
Actinoplanes friuliensis, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

38082..41759
-----------------
DNA (3678bp)
protein (1226aa)
DNA-directed RNA polymerase subunit beta' (EC:2.7.7.6)
DNA-directed RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Short=RNAP subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01322};; RNA polymerase
DNA-directed RNA polymerase subunit beta' n=1 Tax=Actinoplanes friuliensis DSM 7358 RepID=U5VQU8_9ACTO
qs_3_scaffold_35_38
Pyramimonas parkeae, Pyramimonas, Pyramimonadales, Chlorophyta, Viridiplantae

Not on your lists

41794..42927
-----------------
DNA (1134bp)
protein (378aa)
Hypothetical chloroplast RF1 n=1 Tax=Pyramimonas parkeae RepID=C0JX63_9CHLO
Hypothetical chloroplast RF1 {ECO:0000313|EMBL:ACJ71141.1}; TaxID=36894 species="Eukaryota; Viridiplantae; Chlorophyta; prasinophytes; Pyramimonadales; Pyramimonas.;" source="Pyramimonas parkeae.;"
qs_3_scaffold_35_39
Interfilum terricola, Interfilum, Klebsormidiales, Klebsormidiophyceae, Streptophyta, Viridiplantae

Not on your lists

42989..43798
-----------------
DNA (810bp)
protein (270aa)
DNA-directed RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Short=PEP {ECO:0000256|HAMAP-Rule:MF_00059};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00059};; Plastid-encoded RNA polymerase
DNA-directed RNA polymerase subunit alpha n=2 Tax=Ostreococcus tauri RepID=RPOA_OSTTA
rpoA; DNA-directed RNA polymerase subunit alpha
qs_3_scaffold_35_40
Oocystis solitaria, Oocystis, Chlorellales, Trebouxiophyceae, Chlorophyta, Viridiplantae

Not on your lists

comp(43907..44968)
-----------------
DNA (1062bp)
protein (354aa)
Photosystem II protein D1 {ECO:0000256|HAMAP-Rule:MF_01379, ECO:0000256|RuleBase:RU004332}; Short=PSII D1 protein {ECO:0000256|HAMAP-Rule:MF_01379};; EC=1.10.3.9 {ECO:0000256|HAMAP-Rule:MF_01379};; Ph
Photosystem Q(B) protein n=3 Tax=Eukaryota RepID=C7BEI6_OOCSO
Photosystem Q(B) protein
qs_3_scaffold_35_41
Prototheca wickerhamii, Prototheca, Chlorellales, Trebouxiophyceae, Chlorophyta, Viridiplantae

Not on your lists

45121..47073
-----------------
DNA (1953bp)
protein (651aa)
Cell division protein n=1 Tax=Pyramimonas parkeae RepID=C0JX55_9CHLO
Cell division protein FtsH {ECO:0000313|EMBL:AHK10000.1}; TaxID=3111 species="Eukaryota; Viridiplantae; Chlorophyta; Trebouxiophyceae; Chlorellales; Chlorellaceae; Prototheca.;" source="Prototheca wic
ATP-dependent metalloprotease FtsH
Displaying items 31-60 of 91 in total

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