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qs_4_scaffold_1422

Search features with annotation key words

Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qs_4_scaffold_1422_1
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(3..890)
DNA (888bp) protein (296aa)
Transposase IS66 n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0NF53_9EURY
Transposase IS66 {ECO:0000313|EMBL:EMA56183.1}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus thailandensis JCM 13552
transposase (IS66)
qs_4_scaffold_1422_2
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(1497..1679)
DNA (183bp) protein (61aa)
Transposase n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MMT6_9EURY
Transposase {ECO:0000313|EMBL:EMA46034.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus DSM 5350.;"
qs_4_scaffold_1422_3
Haloarcula californiae, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(1860..2966)
DNA (1107bp) protein (369aa)
Transposase (ISH16) n=2 Tax=Haloarcula RepID=M0KSQ7_9EURY
Transposase (ISH16) {ECO:0000313|EMBL:EMA23943.1}; TaxID=662475 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula californiae ATCC 3379
tnp; transposase
qs_4_scaffold_1422_4
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(2963..3097)
DNA (135bp) protein (45aa)
Transposase {ECO:0000313|EMBL:EMA46034.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus DSM 5350.;"
qs_4_scaffold_1422_5
Halothermothrix orenii, Halothermothrix, Halanaerobiales, Clostridia, Firmicutes, Bacteria

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3276..4439
DNA (1164bp) protein (388aa)
ABC transporter related n=1 Tax=Halothermothrix orenii (strain H 168 / OCM 544 / DSM 9562) RepID=B8D052_HALOH
ABC transporter-like protein
ABC transporter related {ECO:0000313|EMBL:ACL68806.1}; TaxID=373903 species="Bacteria; Firmicutes; Clostridia; Halanaerobiales; Halanaerobiaceae; Halothermothrix.;" source="Halothermothrix orenii (str
qs_4_scaffold_1422_6
unknown

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4436..4615
DNA (180bp) protein (60aa)

This feature has no annotations

qs_4_scaffold_1422_7
Osedax symbiont Rs1, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(4612..4791)
DNA (180bp) protein (60aa)
Amidase n=1 Tax=Osedax symbiont Rs1 RepID=S6GHB8_9GAMM
Amidase {ECO:0000313|EMBL:EPJ47515.1}; TaxID=1330036 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; unclassified Oceanospirillaceae.;" source="Osedax symbiont Rs1.;"
amidase
qs_4_scaffold_1422_8
Haloquadratum walsbyi, Haloquadratum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(4792..6126)
DNA (1335bp) protein (445aa)
gatA2; amidase (EC:3.5.1.4)
Aspartyl/glutamyl-tRNA amidotransferase subunit A n=1 Tax=Haloquadratum walsbyi J07HQW2 RepID=U1MVG1_9EURY
Aspartyl/glutamyl-tRNA amidotransferase subunit A {ECO:0000313|EMBL:ERG94369.1}; TaxID=1238425 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloquadratum.;" source="Ha
qs_4_scaffold_1422_9
unknown

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comp(6374..6541)
DNA (168bp) protein (56aa)

This feature has no annotations

qs_4_scaffold_1422_10
Thermincola potens, Thermincola, Clostridiales, Clostridia, Firmicutes, Bacteria

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6743..8236
DNA (1494bp) protein (498aa)
Extracellular solute-binding protein family 1 n=1 Tax=Thermincola potens (strain JR) RepID=D5X9X3_THEPJ
extracellular solute-binding protein
Extracellular solute-binding protein family 1 {ECO:0000313|EMBL:ADG83106.1}; Flags: Precursor;; TaxID=635013 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Thermincola.;" so
qs_4_scaffold_1422_11
Caldatribacterium californiense, Caldatribacterium, Atribacteria, Bacteria

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8236..9171
DNA (936bp) protein (312aa)
hypothetical protein n=1 Tax=candidate division OP9 bacterium OP9-cSCG RepID=UPI0003648F62
binding-protein-dependent transport systems inner membrane component; K02025 multiple sugar transport system permease protein Tax=Caldatribacterium californiense
sugar ABC transporter permease
qs_4_scaffold_1422_12
Thermincola potens, Thermincola, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9168..9995
DNA (828bp) protein (276aa)
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Thermincola potens (strain JR) RepID=D5X9X1_THEPJ
binding-protein-dependent transport system inner membrane protein
Binding-protein-dependent transport systems inner membrane component {ECO:0000313|EMBL:ADG83104.1}; TaxID=635013 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Thermincola.;
qs_4_scaffold_1422_13
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

10101..10343
DNA (243bp) protein (81aa)
Transposase n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MMT6_9EURY
Transposase {ECO:0000313|EMBL:EMA46034.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus DSM 5350.;"
qs_4_scaffold_1422_14
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

10357..10545
DNA (189bp) protein (63aa)
Transposase n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MMT6_9EURY
Transposase {ECO:0000313|EMBL:EMA46034.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus DSM 5350.;"
qs_4_scaffold_1422_15
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(10824..11747)
DNA (924bp) protein (308aa)
Transposase (ISH5) n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0MVV9_9EURY
Transposase (ISH5) {ECO:0000313|EMBL:EMA48550.1}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus thailandensis JCM 135
transposase family protein
Displaying 15 items

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