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QS_4_UNK

In projects: QS_4  |  diaphorachaeota

Metagenomic Context

METAGENOME

Properties

Avg. coverage: 36.18 Longest contig: 272.33 Kbp Bin length: 77.60 Mbp GC content: 61.24 %
Contigs count: 24168 Features count: 98476 rRNAs count: 14 tRNAs count: 809

Genome completeness

megabin RP 49 / 55 MC: 43 BSCG 47 / 51 MC: 44 ASCG 38 / 38 MC: 38
Displaying items 251-300 of 24168 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
qs_4_scaffold_16992
Species: Halorhabdus tiamatea (66.67%)
3 1388 bp 61.10 17.80 100.72
qs_4_scaffold_19331 5 1257 bp 58.95 6.76 100.72
qs_4_scaffold_19060
Species: Halococcus morrhuae (50%)
2 1272 bp 69.89 10.06 100.71
qs_4_scaffold_8475
Order: Natrialbales (66.67%)
3 2324 bp 46.69 9.85 100.69
qs_4_scaffold_15899
Species: Candidatus Halobonum tyrrellensis (66.67%)
3 1460 bp 57.81 6.16 100.69
qs_4_scaffold_24976
Species: Natronomonas moolapensis (50%)
2 1022 bp 55.97 36.69 100.69
qs_4_scaffold_24868
Species: Natrinema altunense (50%)
2 1025 bp 67.71 21.27 100.68
qs_4_scaffold_21067
Species: Haladaptatus paucihalophilus (66.67%)
3 1177 bp 62.11 47.15 100.68
qs_4_scaffold_6679
Species: Natrialba aegyptia (50%)
2 3549 bp 51.23 6.88 100.68
qs_4_scaffold_12200 4 1779 bp 59.58 9.11 100.68
qs_4_scaffold_10753 4 1949 bp 67.21 14.11 100.67
qs_4_scaffold_24072
Class: Halobacteria (66.67%)
3 1052 bp 63.40 6.27 100.67
qs_4_scaffold_17510 2 1359 bp 59.31 6.40 100.66
qs_4_scaffold_5301
Genus: Natronomonas (54.55%)
11 5010 bp 66.95 38.78 100.66
qs_4_scaffold_23776
Order: Haloferacales (66.67%)
3 1064 bp 68.14 26.22 100.66
qs_4_scaffold_10534
Species: Natronomonas pharaonis (66.67%)
3 1979 bp 71.60 18.95 100.66
qs_4_scaffold_23706 4 1067 bp 64.76 62.14 100.66
qs_4_scaffold_13164
Species: Nodularia spumigena (50%)
2 1678 bp 43.98 5.24 100.66
qs_4_scaffold_23296
Species: Halorubrum californiense (50%)
2 1082 bp 62.94 27.63 100.65
qs_4_scaffold_19693
Species: Halorubrum californiense (50%)
2 1240 bp 60.89 7.66 100.65
qs_4_scaffold_12897
Species: Halorubrum californiense (50%)
2 1705 bp 57.65 19.59 100.65
qs_4_scaffold_22875 3 1100 bp 46.45 5.82 100.64
qs_4_scaffold_9095 4 2206 bp 52.95 7.25 100.64
qs_4_scaffold_14070 2 1598 bp 46.75 6.51 100.63
qs_4_scaffold_11001
Species: Halococcus morrhuae (100%)
2 1920 bp 57.55 29.84 100.63
qs_4_scaffold_9834
Species: Halonotius sp. J07HN6 (50%)
2 2081 bp 72.18 12.30 100.63
qs_4_scaffold_22366 3 1121 bp 39.25 5.44 100.62
qs_4_scaffold_22371
Species: Halanaeroarchaeum sulfurireducens (100%)
2 1121 bp 68.87 10.53 100.62
qs_4_scaffold_14009
Class: Halobacteria (66.67%)
3 1604 bp 69.83 8.23 100.62
qs_4_scaffold_7415
Species: Haladaptatus paucihalophilus (75%)
4 2567 bp 72.96 9.66 100.62
qs_4_scaffold_22320
Species: Halococcus morrhuae (50%)
2 1124 bp 70.64 23.75 100.62
qs_4_scaffold_5864
Class: Halobacteria (87.5%)
8 3056 bp 63.45 11.19 100.62
qs_4_scaffold_6292
Order: Natrialbales (50%)
4 2904 bp 62.74 12.36 100.62
qs_4_scaffold_10814
Species: Natronomonas moolapensis (66.67%)
3 1941 bp 69.55 9.07 100.62
qs_4_scaffold_18314
Species: Natronococcus amylolyticus (50%)
2 1312 bp 56.55 38.72 100.61
qs_4_scaffold_21681
Species: Halococcus salifodinae (100%)
2 1151 bp 67.51 118.42 100.61
qs_4_scaffold_15529
Species: Haladaptatus paucihalophilus (100%)
3 1485 bp 72.19 8.89 100.61
qs_4_scaffold_11762 3 1828 bp 63.57 10.23 100.60
qs_4_scaffold_9324
Class: Halobacteria (100%)
3 2165 bp 67.30 11.50 100.60
qs_4_scaffold_21338
Order: Halobacteriales (66.67%)
3 1166 bp 63.12 7.89 100.60
qs_4_scaffold_6990
Genus: Halorubrum (66.67%)
3 2693 bp 62.05 11.81 100.59
qs_4_scaffold_13098 3 1685 bp 52.28 4.93 100.59
qs_4_scaffold_25214
Species: Natronomonas moolapensis (50%)
2 1014 bp 72.78 90.43 100.59
qs_4_scaffold_25139
Species: Salinarchaeum sp. Harcht-Bsk1 (50%)
2 1017 bp 54.28 7.87 100.59
qs_4_scaffold_17546
Species: Haloferax larsenii (50%)
2 1357 bp 70.38 8.47 100.59
qs_4_scaffold_17494
Species: Natronomonas moolapensis (66.67%)
3 1360 bp 75.59 17.43 100.59
qs_4_scaffold_17440
Species: Halococcus saccharolyticus (50%)
4 1363 bp 64.71 48.94 100.59
qs_4_scaffold_24849
Species: Halomicrobium mukohataei (50%)
2 1026 bp 65.01 13.35 100.59
qs_4_scaffold_13829
Genus: Halococcus (75%)
4 2395 bp 64.09 74.53 100.59
qs_4_scaffold_24777
Species: Halorubrum aidingense (50%)
2 1029 bp 65.01 8.45 100.58
Displaying items 251-300 of 24168 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.