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QS_4_UNK

In projects: QS_4  |  diaphorachaeota

Metagenomic Context

METAGENOME

Properties

Avg. coverage: 36.18 Longest contig: 272.33 Kbp Bin length: 77.60 Mbp GC content: 61.24 %
Contigs count: 24168 Features count: 98476 rRNAs count: 14 tRNAs count: 809

Genome completeness

megabin RP 49 / 55 MC: 43 BSCG 47 / 51 MC: 44 ASCG 38 / 38 MC: 38
Displaying items 301-350 of 24168 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
qs_4_scaffold_17290 5 1372 bp 64.14 11.15 100.58
qs_4_scaffold_4002
Species: Halogranum salarium (50%)
6 4119 bp 62.22 10.10 100.58
qs_4_scaffold_20380
Species: Haloferax sp. BAB2207 (50%)
2 1208 bp 49.67 8.61 100.58
qs_4_scaffold_7961
Domain: Bacteria (60%)
5 2431 bp 62.44 13.41 100.58
qs_4_scaffold_20169
Species: Halorhabdus utahensis (50%)
2 1217 bp 72.64 9.61 100.57
qs_4_scaffold_19980
Species: Natrinema versiforme (50%)
2 1226 bp 63.54 26.84 100.57
qs_4_scaffold_10835
Species: Halococcus thailandensis (66.67%)
3 1939 bp 61.01 15.01 100.57
qs_4_scaffold_23580
Species: Haloterrigena thermotolerans (50%)
2 1071 bp 73.11 13.07 100.56
qs_4_scaffold_19345
Order: Halobacteriales (66.67%)
3 1256 bp 69.27 8.20 100.56
qs_4_scaffold_23426
Species: Natrinema pellirubrum (50%)
2 1077 bp 62.49 32.13 100.56
qs_4_scaffold_23353 3 1080 bp 63.43 7.78 100.56
qs_4_scaffold_5406
Class: Halobacteria (80%)
5 5436 bp 58.72 21.38 100.55
qs_4_scaffold_22988
Species: Halobiforma lacisalsi (50%)
2 1095 bp 70.96 77.17 100.55
qs_4_scaffold_18887
Order: Halobacteriales (66.67%)
3 1280 bp 69.06 16.09 100.55
qs_4_scaffold_22914
Class: Halobacteria (66.67%)
3 1098 bp 71.95 10.93 100.55
qs_4_scaffold_13443
Species: Natronobacterium gregoryi (50%)
2 1653 bp 69.21 7.92 100.54
qs_4_scaffold_18785
Species: Haloquadratum walsbyi (50%)
2 1286 bp 48.83 5.37 100.54
qs_4_scaffold_22775
Species: Nostoc sp. PCC 7107 (50%)
2 1104 bp 56.70 16.12 100.54
qs_4_scaffold_22347
Species: Halococcus salifodinae (66.67%)
3 1122 bp 65.78 46.70 100.54
qs_4_scaffold_22164
Order: Halobacteriales (66.67%)
3 1131 bp 66.40 49.69 100.53
qs_4_scaffold_22179
Species: Salinibacter ruber (66.67%)
3 1131 bp 65.08 17.68 100.53
qs_4_scaffold_18119
Order: Haloferacales (66.67%)
3 1322 bp 71.48 11.04 100.53
qs_4_scaffold_17927
Species: Haloarcula californiae (50%)
2 1334 bp 71.21 21.14 100.52
qs_4_scaffold_2268 11 6697 bp 63.25 22.68 100.52
qs_4_scaffold_17814
Species: Halanaeroarchaeum sulfurireducens (50%)
2 1340 bp 71.34 19.25 100.52
qs_4_scaffold_21724 2 1149 bp 46.21 5.92 100.52
qs_4_scaffold_14823
Species: Halorubrum sp. J07HR59 (66.67%)
3 1537 bp 66.36 19.97 100.52
qs_4_scaffold_12612
Order: Halobacteriales (66.67%)
3 2325 bp 65.72 8.04 100.52
qs_4_scaffold_17362 3 1367 bp 62.33 22.82 100.51
qs_4_scaffold_17086
Species: Natronomonas pharaonis (66.67%)
3 1382 bp 63.68 7.45 100.51
qs_4_scaffold_8697
Order: Haloferacales (50%)
4 3358 bp 64.15 7.18 100.51
qs_4_scaffold_16885
Species: Natronolimnobius innermongolicus (66.67%)
3 1394 bp 65.28 8.11 100.50
qs_4_scaffold_16699
Species: Halogeometricum pallidum (50%)
2 1406 bp 68.35 64.37 100.50
qs_4_scaffold_10299
Species: Natrinema altunense (50%)
2 2012 bp 57.60 9.74 100.50
qs_4_scaffold_20289
Species: Haloarcula sinaiiensis (50%)
2 1212 bp 58.99 16.58 100.50
qs_4_scaffold_26867
Species: Halalkalicoccus jeotgali (50%)
2 1418 bp 74.61 11.64 100.49
qs_4_scaffold_2264
Class: Halobacteria (85.71%)
7 6714 bp 59.50 9.99 100.49
qs_4_scaffold_20083
Species: Halorubrum arcis (66.67%)
3 1221 bp 68.80 8.85 100.49
qs_4_scaffold_8875
Species: Halococcus salifodinae (50%)
2 3269 bp 64.97 68.77 100.49
qs_4_scaffold_16210
Species: RIFOXYB12_FULL_Lentisphaerae_65_16_curated (50%)
2 1439 bp 70.12 7.64 100.49
qs_4_scaffold_3529
Species: Natronomonas moolapensis (80%)
5 4532 bp 77.07 21.58 100.49
qs_4_scaffold_13500
Species: halophilic archaeon DL31 (50%)
2 1648 bp 69.42 15.17 100.49
qs_4_scaffold_16063
Species: Halogeometricum pallidum (50%)
2 1448 bp 68.65 79.90 100.48
qs_4_scaffold_11278 2 1884 bp 48.25 5.89 100.48
qs_4_scaffold_13102
Species: Halococcus salifodinae (66.67%)
3 1684 bp 75.95 393.65 100.48
qs_4_scaffold_8478
Genus: Haloarcula (50%)
4 2323 bp 70.90 7.96 100.47
qs_4_scaffold_6271
Species: Halorhabdus utahensis (100%)
2 5527 bp 63.40 35.82 100.47
qs_4_scaffold_11050
Species: Halonotius sp. J07HN4 (50%)
2 1914 bp 70.48 8.73 100.47
qs_4_scaffold_12816
Species: halophilic archaeon DL31 (100%)
2 1714 bp 68.79 24.15 100.47
qs_4_scaffold_9418 6 2150 bp 68.56 8.65 100.47
Displaying items 301-350 of 24168 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.