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QS_4_UNK

In projects: QS_4  |  diaphorachaeota

Metagenomic Context

METAGENOME

Properties

Avg. coverage: 36.18 Longest contig: 272.33 Kbp Bin length: 77.60 Mbp GC content: 61.24 %
Contigs count: 24168 Features count: 98476 rRNAs count: 14 tRNAs count: 809

Genome completeness

megabin RP 49 / 55 MC: 43 BSCG 47 / 51 MC: 44 ASCG 38 / 38 MC: 38
Displaying items 201-250 of 24168 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
qs_4_scaffold_21915
Species: Halococcus morrhuae (50%)
2 1141 bp 73.18 17.27 100.96
qs_4_scaffold_21864
Species: Halorhabdus utahensis (50%)
2 1144 bp 68.88 6.29 100.96
qs_4_scaffold_15952
Species: Halopiger xanaduensis (100%)
2 1456 bp 70.81 9.48 100.96
qs_4_scaffold_19442
Order: Natrialbales (66.67%)
3 1251 bp 56.59 4.96 100.96
qs_4_scaffold_17313
Species: Halococcus saccharolyticus (50%)
2 1370 bp 66.57 13.87 100.95
qs_4_scaffold_17197
Species: uncultured archaeon A07HR67 (66.67%)
3 1376 bp 67.37 7.56 100.95
qs_4_scaffold_14165
Order: Halobacteriales (60%)
5 1590 bp 60.63 8.11 100.94
qs_4_scaffold_17043
Species: Natronomonas moolapensis (50%)
2 1385 bp 51.77 27.22 100.94
qs_4_scaffold_18428
Species: Halogranum salarium (50%)
4 1305 bp 71.11 7.89 100.92
qs_4_scaffold_18041
Species: Halarchaeum acidiphilum (50%)
2 1326 bp 56.41 11.69 100.91
qs_4_scaffold_25629 4 1002 bp 61.88 5.09 100.90
qs_4_scaffold_17874 5 1338 bp 54.78 7.62 100.90
qs_4_scaffold_21838
Species: Halarchaeum acidiphilum (50%)
2 1145 bp 69.96 10.66 100.87
qs_4_scaffold_13985
Class: Halobacteria (75%)
4 1606 bp 70.98 8.90 100.87
qs_4_scaffold_17083
Species: Halococcus salifodinae (100%)
3 1383 bp 66.81 28.56 100.87
qs_4_scaffold_21538
Species: Haloarcula japonica (50%)
2 1157 bp 71.91 298.18 100.86
qs_4_scaffold_6212
Species: Halococcus salifodinae (100%)
5 2933 bp 69.66 313.88 100.85
qs_4_scaffold_18532
Species: Halalkalicoccus jeotgali (50%)
2 1300 bp 64.46 58.85 100.85
qs_4_scaffold_20713
Species: Hydrogenovibrio marinus (50%)
2 1193 bp 48.78 4.78 100.84
qs_4_scaffold_23423 3 1077 bp 66.20 7.43 100.84
qs_4_scaffold_20515 4 1202 bp 66.56 28.45 100.83
qs_4_scaffold_7552
Species: Natronococcus amylolyticus (50%)
2 2532 bp 71.88 19.87 100.83
qs_4_scaffold_23216 2 1086 bp 59.30 6.08 100.83
qs_4_scaffold_20121
Species: Salinibacter ruber (100%)
2 1220 bp 67.79 46.48 100.82
qs_4_scaffold_15783
Order: Halobacteriales (75%)
4 1467 bp 67.55 9.07 100.82
qs_4_scaffold_22769
Species: Halococcus saccharolyticus (50%)
2 1104 bp 70.38 114.49 100.82
qs_4_scaffold_19921
Genus: Haloterrigena (66.67%)
3 1229 bp 65.83 7.89 100.81
qs_4_scaffold_3899 3 4202 bp 65.54 50.59 100.81
qs_4_scaffold_15392
Species: Natronococcus amylolyticus (50%)
4 1494 bp 65.73 6.96 100.80
qs_4_scaffold_11392
Order: Haloferacales (66.67%)
3 1872 bp 48.88 6.62 100.80
qs_4_scaffold_17055
Species: Natronococcus amylolyticus (50%)
2 1384 bp 71.10 9.90 100.79
qs_4_scaffold_3304
Species: Haloquadratum walsbyi (60%)
5 4783 bp 60.44 21.28 100.79
qs_4_scaffold_16999
Species: Haladaptatus paucihalophilus (100%)
2 1387 bp 60.63 6.49 100.79
qs_4_scaffold_19242
Species: Haladaptatus paucihalophilus (100%)
2 1262 bp 67.99 12.12 100.79
qs_4_scaffold_19064 3 1271 bp 65.38 69.94 100.79
qs_4_scaffold_5886 8 3051 bp 51.66 8.42 100.79
qs_4_scaffold_3891
Species: Halobacterium sp. DL1 (100%)
2 4206 bp 60.98 12.84 100.79
qs_4_scaffold_12102
Species: Haloferax gibbonsii (50%)
2 1789 bp 69.03 9.61 100.78
qs_4_scaffold_13286
Species: Natronomonas pharaonis (50%)
2 1667 bp 47.51 9.72 100.78
qs_4_scaffold_14803
Species: Haloquadratum walsbyi (66.67%)
3 1539 bp 58.67 5.85 100.78
qs_4_scaffold_21524
Species: Nitrosomonas communis (50%)
2 1158 bp 48.53 4.32 100.78
qs_4_scaffold_21308
Species: Natronococcus jeotgali (50%)
2 1167 bp 68.12 8.83 100.77
qs_4_scaffold_24433
Species: Haladaptatus paucihalophilus (100%)
2 1039 bp 68.33 7.89 100.77
qs_4_scaffold_24362
Species: Halococcus morrhuae (50%)
2 1042 bp 60.56 46.55 100.77
qs_4_scaffold_8322
Species: Haladaptatus paucihalophilus (50%)
4 2352 bp 67.69 11.69 100.76
qs_4_scaffold_18186
Species: Haloarcula argentinensis (100%)
2 1319 bp 69.75 15.31 100.76
qs_4_scaffold_6972 5 2698 bp 61.45 14.31 100.74
qs_4_scaffold_19965
Species: Aphanizomenon flos-aquae (50%)
2 1227 bp 47.84 7.42 100.73
qs_4_scaffold_22966
Species: Natronomonas pharaonis (50%)
2 1096 bp 71.26 31.02 100.73
qs_4_scaffold_17152
Species: Halococcus hamelinensis (50%)
2 1379 bp 62.15 17.98 100.73
Displaying items 201-250 of 24168 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.