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QS_4_UNK

In projects: QS_4  |  diaphorachaeota
Displaying items 1-50 of 24168 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
qs_4_scaffold_11 294 272329 bp 58.53 117.81 80.89
qs_4_scaffold_18 247 261744 bp 56.19 14.34 77.36
qs_4_scaffold_13
Genus: Haloarcula (64.88%)
242 210419 bp 63.62 20.93 84.78
qs_4_scaffold_23 168 198832 bp 56.59 14.27 75.97
qs_4_scaffold_58
Genus: Haloarcula (51.9%)
237 194971 bp 64.55 21.35 88.97
qs_4_scaffold_31 166 183132 bp 55.17 14.87 76.05
qs_4_scaffold_0 212 170144 bp 60.13 240.88 85.41
qs_4_scaffold_38 149 160550 bp 55.55 14.39 78.63
qs_4_scaffold_194 160 160112 bp 55.63 14.60 78.47
qs_4_scaffold_62 137 144324 bp 55.99 14.31 79.67
qs_4_scaffold_2 135 137042 bp 55.63 14.37 78.14
qs_4_scaffold_68 138 136099 bp 56.42 14.31 77.03
qs_4_scaffold_4 137 135173 bp 56.27 14.35 82.12
qs_4_scaffold_81 148 134092 bp 59.27 62.92 81.57
qs_4_scaffold_3 135 133453 bp 55.29 14.71 75.44
qs_4_scaffold_41 126 129987 bp 54.81 14.80 75.98
qs_4_scaffold_9 96 125150 bp 55.48 14.62 77.95
qs_4_scaffold_5 118 121303 bp 55.46 14.75 73.80
qs_4_scaffold_163 152 119035 bp 63.96 17.50 89.41
qs_4_scaffold_99 126 118664 bp 55.63 14.48 78.71
qs_4_scaffold_83
Genus: Haloarcula (69.85%)
136 118534 bp 63.29 22.13 89.05
qs_4_scaffold_7 90 114193 bp 55.13 14.69 70.66
qs_4_scaffold_54
Class: Halobacteria (75.53%)
94 113979 bp 68.21 18.34 80.76
qs_4_scaffold_98
Class: Halobacteria (71.55%)
116 108092 bp 59.97 16.87 82.91
qs_4_scaffold_26
Class: Halobacteria (55.7%)
79 107597 bp 67.32 24.69 87.16
qs_4_scaffold_10
Genus: Haloarcula (75.73%)
103 106706 bp 64.60 20.27 89.50
qs_4_scaffold_51 116 104646 bp 55.58 14.28 79.00
qs_4_scaffold_70 87 102598 bp 53.63 15.06 66.89
qs_4_scaffold_16 101 102250 bp 56.26 14.31 80.02
qs_4_scaffold_29 106 101058 bp 55.11 15.04 76.56
qs_4_scaffold_22 100 97621 bp 54.94 14.65 75.72
qs_4_scaffold_107
Order: Halobacteriales (67.44%)
86 94319 bp 68.36 30.77 85.87
qs_4_scaffold_59 71 94115 bp 56.35 14.69 81.16
qs_4_scaffold_191 98 92843 bp 66.11 23.06 72.63
qs_4_scaffold_49 107 92684 bp 55.27 14.90 78.12
qs_4_scaffold_253
Class: Halobacteria (71.08%)
83 92404 bp 60.57 24.96 86.94
qs_4_scaffold_409 92 90543 bp 56.75 14.69 81.31
qs_4_scaffold_130
Order: Halobacteriales (57.3%)
89 90124 bp 60.97 221.08 85.48
qs_4_scaffold_37 97 89395 bp 55.69 14.22 79.66
qs_4_scaffold_128 66 87562 bp 55.49 14.55 72.61
qs_4_scaffold_47 74 87069 bp 54.65 14.33 81.67
qs_4_scaffold_129
Class: Halobacteria (74.68%)
79 87001 bp 67.75 17.78 85.55
qs_4_scaffold_30 78 86759 bp 56.30 14.80 73.38
qs_4_scaffold_164 81 86635 bp 54.65 14.80 72.50
qs_4_scaffold_75
Genus: Haloarcula (71.91%)
89 84117 bp 64.89 20.85 86.87
qs_4_scaffold_111 85 83759 bp 55.09 15.04 73.16
qs_4_scaffold_212 94 82594 bp 56.89 14.54 79.48
qs_4_scaffold_125
Class: Halobacteria (81.71%)
82 82424 bp 65.91 17.50 87.13
qs_4_scaffold_33
Domain: Archaea (77.92%)
77 82104 bp 62.48 17.39 81.82
qs_4_scaffold_236
Genus: Haloarcula (71.28%)
94 81160 bp 63.99 22.00 89.12
Displaying items 1-50 of 24168 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.