ggKbase home page

qs_6_scaffold_398_10

Organism: QS_6_UNK

megabin RP 52 / 55 MC: 48 BSCG 49 / 51 MC: 46 ASCG 38 / 38 MC: 38
Location: comp(8990..10354)

Top 3 Functional Annotations

Value Algorithm Source
tRNA pseudouridine synthase {ECO:0000256|RuleBase:RU003792}; EC=5.4.99.- {ECO:0000256|RuleBase:RU003792};; Flags: Fragment;; TaxID=436017 species="Eukaryota; Viridiplantae; Chlorophyta; prasinophytes; similarity UNIPROT
DB: UniProtKB
  • Identity: 42.3
  • Coverage: 324.0
  • Bit_score: 255
  • Evalue 1.80e-64
tRNA pseudouridine synthase (Fragment) n=1 Tax=Ostreococcus lucimarinus (strain CCE9901) RepID=A4S9Q6_OSTLU similarity UNIREF
DB: UNIREF100
  • Identity: 42.3
  • Coverage: 324.0
  • Bit_score: 255
  • Evalue 1.30e-64
tRNA pseudouridine synthase A similarity KEGG
DB: KEGG
  • Identity: 32.6
  • Coverage: 264.0
  • Bit_score: 103
  • Evalue 1.40e-19

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Ostreococcus 'lucimarinus' → Ostreococcus → Mamiellales → Mamiellophyceae → Chlorophyta → Viridiplantae

Sequences

DNA sequence
Length: 1365
ATGTTCCCCGGGCGCAGTTCCGACGAGCACCACTGCTCTGACAAACATGGCGTTGGTGTAATGGGCGAGCGAAGCACAAGCATGGCAGAAGCGCTGGAGGGAGGTGACGCAGAGCGTGGTGCGCCTCAGGAAGAGGCTCGCGAGCAGGAGCAGCAGCCGCCGCGAGGGCGCAAGGTGGCGCTGGTGTTCGGGTACAACGGCTCGCAGTTCCAGGGTATGCAAATCAACCCCGGCGCAACCACCGTGGAAGGCTCCATGCTCGCTGCTCTGCATCACGCCGGCCTCTGCTCCTCTGACTCTGAGAAGGCCGTCTTCTGGTCCCGCGCCGCCCGTACCGACAAGGGCGTCTCCGCCTCCGGCCAAACCGCAGCATTCCGCCTCCTTCCTGGCATCAGGCCCGAGTGTGTCACCCCGTGCCTCAACCAGTCACTGCCCGCTGACATCCGCGCCTATGGCTGCGTTGAAACCACCTCCTCCTTCAACGCCCGCACCTCTTGCGATTCCCGCACCTACGAGTACATCGCACCTGTCTTCGCCTTCGACCCTTCCGCGTACCGCAGCAAGGCGCTGCAAGACTCGCTCAAGATTGGCCAGAAGCGTGACTTCGACCCCGCCTTCACTCTATCTGACGAGCACATCACCCGCTTGAACAATTTGCTCCACAAATTCGTAGGCGCGCACAACTTCCACAACTTCACTGTCAAAGTCTCACCCACAGACGCCACCGTCAACCGCATCATCTACTCTTTCGAGTGCAGCAACCCTTTCTTCATCGACAACATGCAATGCGTTTCCATCGTCGTTCAAGGGCAGTCGTTCATGCTGCATCAGATCCGCAAGATGGTAGGCACTGCCATTGCCGTCGATCGCGGCGATGTCTCCGAGAGCCGCATCGACCTTGCGCTCAAGTCGCGCTCTCAGGTGACTGCGCCAATGGCGCCCGAAACTGGGCTATTCTTACGAGAAACTGGATTTAAGCGTTACAACAGCAAATGGGGCCATTTGTACACGCCCTTGAAAGTGTCCGACTTCGCCGAGGAGGTGAAGCGCTTCAAAACTGAAGTCATATACCCCCACATTGTGCAAACAGAGAGAAGAGAAGGTATCTTCGCGCATTGGTTACGATCGATGAACTCTTCGTCGCTGCACCAGGTCCAGGCGCCGCCGTCGGCAGCGCAGCGAGTAGCACAGGAGCAACGCATCGAGCAGCAGCAGGCAATGCAGGATCGTAGCGAGCAAGAAAAGCAGCAACGGGTCAACACCAGAAAACGCACGAAAGGTGCCCTTGGTCGTGATGGTGGCAAGCGTAAGCGAGTGAGATCAACATGGATCGAGAGCTTCGATCCCGAGTGGTCCGACAGCTAG
PROTEIN sequence
Length: 455
MFPGRSSDEHHCSDKHGVGVMGERSTSMAEALEGGDAERGAPQEEAREQEQQPPRGRKVALVFGYNGSQFQGMQINPGATTVEGSMLAALHHAGLCSSDSEKAVFWSRAARTDKGVSASGQTAAFRLLPGIRPECVTPCLNQSLPADIRAYGCVETTSSFNARTSCDSRTYEYIAPVFAFDPSAYRSKALQDSLKIGQKRDFDPAFTLSDEHITRLNNLLHKFVGAHNFHNFTVKVSPTDATVNRIIYSFECSNPFFIDNMQCVSIVVQGQSFMLHQIRKMVGTAIAVDRGDVSESRIDLALKSRSQVTAPMAPETGLFLRETGFKRYNSKWGHLYTPLKVSDFAEEVKRFKTEVIYPHIVQTERREGIFAHWLRSMNSSSLHQVQAPPSAAQRVAQEQRIEQQQAMQDRSEQEKQQRVNTRKRTKGALGRDGGKRKRVRSTWIESFDPEWSDS*