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QS_9_UNK

In projects: QS_9  |  diaphorachaeota

Metagenomic Context

METAGENOME

Properties

Avg. coverage: 24.01 Longest contig: 255.34 Kbp Bin length: 53.74 Mbp GC content: 62.24 %
Contigs count: 17166 Features count: 68256 rRNAs count: 6 tRNAs count: 714

Genome completeness

megabin RP 51 / 55 MC: 48 BSCG 45 / 51 MC: 39 ASCG 38 / 38 MC: 38
Displaying items 251-300 of 17166 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
qs_9_scaffold_11863
Species: Haladaptatus paucihalophilus (66.67%)
3 1726 bp 68.66 8.05 100.46
qs_9_scaffold_19273
Species: Natronomonas moolapensis (100%)
2 1956 bp 67.84 49.08 100.46
qs_9_scaffold_15839
Species: Natronococcus occultus (50%)
2 1308 bp 71.18 19.34 100.46
qs_9_scaffold_15802
Species: Methanocorpusculum labreanum (50%)
2 1311 bp 50.19 5.34 100.46
qs_9_scaffold_6671
Class: Halobacteria (100%)
3 2843 bp 43.72 5.38 100.46
qs_9_scaffold_18914
Species: Haloquadratum walsbyi (50%)
2 1099 bp 56.96 6.10 100.46
qs_9_scaffold_11626
Order: Halobacteriales (66.67%)
3 1759 bp 71.29 25.92 100.46
qs_9_scaffold_18858
Species: Natronomonas pharaonis (50%)
2 1102 bp 68.51 14.61 100.45
qs_9_scaffold_2975
Domain: Bacteria (60%)
5 5092 bp 61.70 8.66 100.45
qs_9_scaffold_11343
Species: Haloarcula marismortui (50%)
2 1801 bp 69.07 37.98 100.44
qs_9_scaffold_13078 3 1577 bp 45.28 6.47 100.44
qs_9_scaffold_26176
Species: Halomicrobium mukohataei (100%)
3 1365 bp 64.54 12.31 100.44
qs_9_scaffold_18264
Species: Halorhabdus utahensis (50%)
2 1138 bp 72.41 8.35 100.44
qs_9_scaffold_10985
Order: Halobacteriales (66.67%)
3 1852 bp 57.40 6.86 100.43
qs_9_scaffold_10912
Species: Halostagnicola sp. A56 (75%)
4 1864 bp 66.20 26.77 100.43
qs_9_scaffold_14635 3 1410 bp 66.24 5.53 100.43
qs_9_scaffold_14515
Species: Halarchaeum acidiphilum (66.67%)
3 1422 bp 57.59 5.34 100.42
qs_9_scaffold_12242
Species: halophilic archaeon J07HB67 (100%)
2 1676 bp 68.85 38.31 100.42
qs_9_scaffold_14370
Species: Natronomonas moolapensis (50%)
2 1437 bp 71.05 13.08 100.42
qs_9_scaffold_12167
Species: Haloarcula amylolytica (50%)
2 1685 bp 61.31 23.92 100.42
qs_9_scaffold_17115 3 1213 bp 46.50 5.28 100.41
qs_9_scaffold_10364
Species: Haloferax sp. Arc-Hr (50%)
2 1951 bp 61.61 8.00 100.41
qs_9_scaffold_10648 7 4178 bp 67.98 14.22 100.41
qs_9_scaffold_10269
Species: Natronomonas moolapensis (50%)
4 1969 bp 64.80 23.26 100.41
qs_9_scaffold_10176
Species: Natronomonas moolapensis (100%)
2 1984 bp 69.46 27.72 100.40
qs_9_scaffold_13860
Species: Halorhabdus tiamatea (50%)
2 1491 bp 61.37 6.44 100.40
qs_9_scaffold_20583
Species: Haladaptatus paucihalophilus (50%)
2 1004 bp 58.47 5.78 100.40
qs_9_scaffold_16139
Species: Natronomonas moolapensis (100%)
2 2259 bp 68.48 121.16 100.40
qs_9_scaffold_16343
Species: Natronomonas pharaonis (50%)
2 1270 bp 72.52 19.45 100.39
qs_9_scaffold_7624
Species: Halococcus thailandensis (100%)
3 2552 bp 56.82 10.50 100.39
qs_9_scaffold_2707
Species: Halorhabdus utahensis (50%)
4 5412 bp 52.01 10.11 100.39
qs_9_scaffold_20109
Species: Thermoactinomyces sp. CDF (50%)
2 1031 bp 51.41 3.98 100.39
qs_9_scaffold_15940
Species: Natrinema pallidum (50%)
2 1300 bp 63.15 6.69 100.38
qs_9_scaffold_10156
Species: Halococcus saccharolyticus (50%)
4 2612 bp 69.64 57.92 100.38
qs_9_scaffold_19793
Species: Natrinema versiforme (50%)
2 1049 bp 66.44 6.77 100.38
qs_9_scaffold_5786
Species: Halococcus thailandensis (100%)
3 3186 bp 62.12 14.94 100.38
qs_9_scaffold_12900
Domain: Archaea (66.67%)
3 1596 bp 74.00 41.79 100.38
qs_9_scaffold_19326
Species: Haladaptatus paucihalophilus (50%)
2 1076 bp 69.05 10.50 100.37
qs_9_scaffold_12740
Species: Natronomonas pharaonis (100%)
3 1617 bp 69.57 15.21 100.37
qs_9_scaffold_15366
Genus: Natronomonas (66.67%)
3 1348 bp 75.82 26.78 100.37
qs_9_scaffold_2352
Class: Halobacteria (75%)
4 5942 bp 54.44 8.73 100.37
qs_9_scaffold_19060
Species: Halobiforma lacisalsi (50%)
2 1091 bp 66.36 5.50 100.37
qs_9_scaffold_19065 3 1091 bp 52.15 6.05 100.37
qs_9_scaffold_12534
Species: Halosimplex carlsbadense (100%)
3 1638 bp 72.10 15.26 100.37
qs_9_scaffold_15033
Order: Halobacteriales (66.67%)
3 1375 bp 65.89 20.80 100.36
qs_9_scaffold_18831
Species: Halococcus saccharolyticus (100%)
2 1103 bp 73.62 48.32 100.36
qs_9_scaffold_14926
Species: Natronomonas pharaonis (66.67%)
3 1384 bp 77.75 26.73 100.36
qs_9_scaffold_18677
Species: GWF2_Bacteroidetes_43_11_curated (100%)
2 1112 bp 61.24 5.13 100.36
qs_9_scaffold_18493
Species: Natrinema sp. J7-2 (50%)
2 1124 bp 62.46 29.18 100.36
qs_9_scaffold_18443
Species: Natronomonas moolapensis (50%)
2 1127 bp 68.50 12.24 100.35
Displaying items 251-300 of 17166 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.