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QS_9_UNK

In projects: QS_9  |  diaphorachaeota

Metagenomic Context

METAGENOME

Properties

Avg. coverage: 24.01 Longest contig: 255.34 Kbp Bin length: 53.74 Mbp GC content: 62.24 %
Contigs count: 17166 Features count: 68256 rRNAs count: 6 tRNAs count: 714

Genome completeness

megabin RP 51 / 55 MC: 48 BSCG 45 / 51 MC: 39 ASCG 38 / 38 MC: 38
Displaying items 301-350 of 17166 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
qs_9_scaffold_7644
Species: Halococcus saccharolyticus (66.67%)
3 2547 bp 66.98 22.85 100.35
qs_9_scaffold_2738
Domain: Archaea (80%)
5 5378 bp 64.89 13.13 100.35
qs_9_scaffold_11986
Species: Candidatus Nanosalina sp. J07AB43 (50%)
2 1710 bp 37.72 4.15 100.35
qs_9_scaffold_18102
Species: Halorubrum coriense (50%)
2 1148 bp 73.08 24.39 100.35
qs_9_scaffold_8636
Species: Halalkalicoccus jeotgali (50%)
4 3163 bp 55.67 7.81 100.35
qs_9_scaffold_8577
Species: Natrinema pellirubrum (50%)
2 2311 bp 61.19 38.42 100.35
qs_9_scaffold_17905
Species: Haloarcula hispanica (50%)
2 1160 bp 71.12 15.34 100.35
qs_9_scaffold_17860
Species: halophilic archaeon J07HX64 (50%)
2 1163 bp 76.01 17.37 100.34
qs_9_scaffold_11632
Order: Halobacteriales (100%)
3 1758 bp 64.90 73.38 100.34
qs_9_scaffold_17647
Species: Halosimplex carlsbadense (50%)
2 1175 bp 56.26 5.53 100.34
qs_9_scaffold_11440
Species: Halococcus salifodinae (66.67%)
3 1785 bp 65.88 23.98 100.34
qs_9_scaffold_11224
Species: Natronomonas pharaonis (66.67%)
3 1815 bp 71.74 136.25 100.33
qs_9_scaffold_17088
Species: Halorubrum kocurii (50%)
2 1214 bp 65.82 108.24 100.33
qs_9_scaffold_13470
Species: Halococcus saccharolyticus (50%)
2 1534 bp 69.75 8.47 100.33
qs_9_scaffold_16566
Species: Roseiflexus sp. RS-1 (50%)
2 1253 bp 56.82 10.30 100.32
qs_9_scaffold_16498
Species: Candidatus Halobonum tyrrellensis (50%)
2 1259 bp 61.56 17.95 100.32
qs_9_scaffold_16458
Species: Haloquadratum walsbyi (100%)
2 1262 bp 52.85 5.63 100.32
qs_9_scaffold_16402
Species: Rhodothermus marinus (100%)
2 1265 bp 70.75 8.22 100.32
qs_9_scaffold_16417
Order: Halobacteriales (66.67%)
3 1265 bp 65.69 78.66 100.32
qs_9_scaffold_16420 5 1265 bp 44.27 7.35 100.32
qs_9_scaffold_16279
Species: Halococcus salifodinae (50%)
2 1274 bp 67.66 40.50 100.31
qs_9_scaffold_16292 3 1274 bp 57.61 5.18 100.31
qs_9_scaffold_16234
Species: Haladaptatus paucihalophilus (100%)
2 1277 bp 66.01 36.10 100.31
qs_9_scaffold_16013
Species: Halogranum salarium (50%)
2 1295 bp 68.26 7.03 100.31
qs_9_scaffold_21071
Species: Haloferax lucentense (50%)
2 1621 bp 71.13 9.19 100.31
qs_9_scaffold_12698
Species: Halococcus hamelinensis (100%)
2 1621 bp 53.79 4.01 100.31
qs_9_scaffold_10339
Class: Halobacteria (66.67%)
3 1956 bp 71.32 10.17 100.31
qs_9_scaffold_7413
Species: Haloarcula hispanica (50%)
2 2614 bp 69.36 9.79 100.31
qs_9_scaffold_15813
Species: Halococcus salifodinae (50%)
2 1310 bp 58.63 6.72 100.31
qs_9_scaffold_26065
Species: Haloarcula japonica (50%)
2 1316 bp 70.74 11.25 100.30
qs_9_scaffold_15670
Species: Halomicrobium mukohataei (50%)
2 1322 bp 63.69 10.59 100.30
qs_9_scaffold_16107
Species: Haloferax sulfurifontis (50%)
4 1992 bp 67.67 8.48 100.30
qs_9_scaffold_12307
Species: R_Acidobacteria_67_21 (50%)
2 1666 bp 68.37 16.75 100.30
qs_9_scaffold_15529
Species: Salinarchaeum sp. Harcht-Bsk1 (100%)
2 1334 bp 62.37 7.87 100.30
qs_9_scaffold_10651
Species: Halorubrum aidingense (50%)
4 3371 bp 63.25 8.69 100.30
qs_9_scaffold_20347
Species: Natronomonas pharaonis (100%)
2 1017 bp 67.94 41.49 100.30
qs_9_scaffold_12073
Class: Halobacteria (66.67%)
3 1699 bp 60.80 7.18 100.29
qs_9_scaffold_20302
Species: Methanosaeta thermophila (50%)
2 1020 bp 50.59 6.47 100.29
qs_9_scaffold_24659
Species: Halococcus hamelinensis (100%)
2 1367 bp 61.59 7.46 100.29
qs_9_scaffold_20230
Species: Natronorubrum bangense (50%)
2 1026 bp 65.79 11.79 100.29
qs_9_scaffold_15051 5 1373 bp 41.59 4.52 100.29
qs_9_scaffold_20041
Species: Halogeometricum pallidum (50%)
2 1035 bp 61.35 3.77 100.29
qs_9_scaffold_5177
Genus: Haloquadratum (50%)
4 3464 bp 60.88 7.68 100.29
qs_9_scaffold_14851
Species: Natronolimnobius innermongolicus (100%)
3 1391 bp 62.47 6.11 100.29
qs_9_scaffold_19884
Species: halophilic archaeon DL31 (50%)
2 1044 bp 73.37 144.54 100.29
qs_9_scaffold_22595
Species: Salinibacter ruber (100%)
2 1394 bp 67.86 56.31 100.29
qs_9_scaffold_14715 2 1403 bp 58.45 6.34 100.29
qs_9_scaffold_19668 2 1056 bp 69.98 7.86 100.28
qs_9_scaffold_19621
Order: Halobacteriales (100%)
3 1059 bp 70.73 44.48 100.28
qs_9_scaffold_19626
Order: Halobacteriales (100%)
3 1059 bp 71.58 140.13 100.28
Displaying items 301-350 of 17166 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.