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SW_6_UNK

In projects: SW_6  |  diaphorachaeota

Metagenomic Context

METAGENOME

Properties

Avg. coverage: 22.55 Longest contig: 253.36 Kbp Bin length: 44.06 Mbp GC content: 60.59 %
Contigs count: 15674 Features count: 56776 rRNAs count: 17 tRNAs count: 494

Genome completeness

megabin RP 51 / 55 MC: 43 BSCG 50 / 51 MC: 38 ASCG 38 / 38 MC: 38
Displaying items 15301-15350 of 15674 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
sw_6_scaffold_3792
Genus: Haloferax (100%)
3 3045 bp 60.53 7.68 100.30
sw_6_scaffold_5373
Class: Actinobacteria (66.67%)
3 2354 bp 67.97 9.60 100.30
sw_6_scaffold_17767
Species: Mycobacterium lentiflavum (50%)
2 1008 bp 63.79 6.55 100.30
sw_6_scaffold_17776
Species: RBG_16_Thaumarchaeota_49_8_curated (50%)
2 1008 bp 74.60 12.50 100.30
sw_6_scaffold_17921
Species: Halococcus salifodinae (100%)
2 1002 bp 69.46 14.17 100.30
sw_6_scaffold_12025
Species: Natronomonas pharaonis (50%)
2 1334 bp 64.92 27.06 100.30
sw_6_scaffold_6796
Species: Natronomonas pharaonis (100%)
2 1992 bp 71.94 30.37 100.30
sw_6_scaffold_12273
Species: Halococcus saccharolyticus (50%)
2 1316 bp 69.60 11.25 100.30
sw_6_scaffold_9070
Species: Halosimplex carlsbadense (75%)
4 1624 bp 67.12 17.43 100.31
sw_6_scaffold_5677
Species: Anabaena variabilis (50%)
2 2270 bp 47.09 8.50 100.31
sw_6_scaffold_9159
Species: Natronomonas pharaonis (66.67%)
3 1615 bp 69.85 41.61 100.31
sw_6_scaffold_12962 3 1265 bp 43.00 6.09 100.32
sw_6_scaffold_4955
Order: Halobacteriales (50%)
4 2509 bp 58.95 11.92 100.32
sw_6_scaffold_7467
Species: Alkalilimnicola ehrlichii (50%)
2 1869 bp 61.48 6.47 100.32
sw_6_scaffold_13332
Order: Haloferacales (66.67%)
3 1241 bp 69.70 11.68 100.32
sw_6_scaffold_13404
Species: Salinarchaeum sp. Harcht-Bsk1 (50%)
2 1235 bp 63.08 12.63 100.32
sw_6_scaffold_29233
Species: Haloferax sp. ATCC BAA-645 (50%)
2 1232 bp 49.92 6.28 100.33
sw_6_scaffold_16079
Species: Halogranum salarium (66.67%)
3 1537 bp 47.36 8.46 100.33
sw_6_scaffold_6202
Class: Halobacteria (100%)
3 2126 bp 51.69 7.24 100.33
sw_6_scaffold_20664
Species: Halobacterium sp. DL1 (100%)
3 2126 bp 75.16 9.55 100.33
sw_6_scaffold_31710
Species: Kingella oralis (50%)
2 1196 bp 59.45 6.86 100.33
sw_6_scaffold_7937
Species: Halosimplex carlsbadense (100%)
3 1791 bp 75.66 17.25 100.34
sw_6_scaffold_14171
Species: Halosimplex carlsbadense (100%)
2 1190 bp 73.28 13.61 100.34
sw_6_scaffold_10466
Species: Halostagnicola sp. A56 (50%)
4 1471 bp 62.88 17.81 100.34
sw_6_scaffold_14544
Species: Natronomonas pharaonis (50%)
2 1169 bp 74.34 42.94 100.34
sw_6_scaffold_14665
Species: Thioalkalivibrio sulfidiphilus (50%)
2 1163 bp 68.10 7.39 100.34
sw_6_scaffold_10666
Species: uncultured archaeon A07HB70 (50%)
2 1450 bp 72.97 8.34 100.35
sw_6_scaffold_14855
Species: Natronomonas moolapensis (50%)
2 1151 bp 66.64 46.31 100.35
sw_6_scaffold_15234
Species: Caldicellulosiruptor lactoaceticus (50%)
2 1130 bp 50.00 10.62 100.35
sw_6_scaffold_11227
Species: Halobacterium sp. DL1 (100%)
2 1399 bp 70.76 10.08 100.36
sw_6_scaffold_15438
Species: Halomicrobium mukohataei (50%)
2 1118 bp 66.73 14.31 100.36
sw_6_scaffold_11414
Order: Halobacteriales (100%)
3 1384 bp 69.58 15.25 100.36
sw_6_scaffold_7069 3 1937 bp 63.09 7.49 100.36
sw_6_scaffold_11206
Domain: Bacteria (100%)
3 2188 bp 60.74 9.78 100.37
sw_6_scaffold_16213
Species: BJP_IG2158_Thermoplasmatales_53_16 (50%)
2 1079 bp 71.36 8.16 100.37
sw_6_scaffold_16216
Species: Haloquadratum sp. J07HQX50 (100%)
2 1079 bp 61.45 10.38 100.37
sw_6_scaffold_16375
Species: Halobiforma lacisalsi (50%)
2 1070 bp 60.09 6.92 100.37
sw_6_scaffold_27888
Species: Halosimplex carlsbadense (100%)
3 1602 bp 69.73 16.29 100.37
sw_6_scaffold_16428 2 1067 bp 50.14 8.15 100.37
sw_6_scaffold_20368
Species: Natronomonas moolapensis (66.67%)
3 1330 bp 72.26 31.88 100.38
sw_6_scaffold_28491
Species: Haloarcula amylolytica (66.67%)
3 1324 bp 65.03 16.84 100.38
sw_6_scaffold_12244
Species: Halalkalicoccus jeotgali (100%)
2 1318 bp 67.22 10.32 100.38
sw_6_scaffold_16735
Species: Inquilinus limosus (50%)
2 1052 bp 75.48 8.46 100.38
sw_6_scaffold_16736
Species: Fulvimarina pelagi (50%)
2 1052 bp 66.83 7.98 100.38
sw_6_scaffold_19103
Species: Gemmatimonadetes bacterium KBS708 (50%)
2 1578 bp 53.93 5.96 100.38
sw_6_scaffold_7644
Species: Natronomonas pharaonis (100%)
2 1838 bp 53.16 5.60 100.38
sw_6_scaffold_16888
Species: Halonotius sp. J07HN6 (100%)
2 1046 bp 69.12 21.03 100.38
sw_6_scaffold_16963
Species: Hymenobacter sp. DG25B (50%)
2 1043 bp 40.08 5.27 100.38
sw_6_scaffold_31379
Class: Halobacteria (66.67%)
3 1300 bp 66.92 36.92 100.38
sw_6_scaffold_9670
Species: Haloarcula vallismortis (100%)
3 1557 bp 48.75 4.75 100.38
Displaying items 15301-15350 of 15674 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.