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SW_6_UNK

In projects: SW_6  |  diaphorachaeota

Metagenomic Context

METAGENOME

Properties

Avg. coverage: 22.55 Longest contig: 253.36 Kbp Bin length: 44.06 Mbp GC content: 60.59 %
Contigs count: 15674 Features count: 56776 rRNAs count: 17 tRNAs count: 494

Genome completeness

megabin RP 51 / 55 MC: 43 BSCG 50 / 51 MC: 38 ASCG 38 / 38 MC: 38
Displaying items 251-300 of 15674 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
sw_6_scaffold_15714
Species: Halococcus thailandensis (50%)
2 1103 bp 49.50 3.81 100.64
sw_6_scaffold_4115 3 2868 bp 50.28 7.32 100.63
sw_6_scaffold_12717
Species: Haloferax elongans (50%)
2 1282 bp 63.57 6.79 100.62
sw_6_scaffold_10475
Species: Indibacter alkaliphilus (100%)
2 1470 bp 34.83 4.63 100.61
sw_6_scaffold_12378
Species: Halobacterium sp. DL1 (100%)
2 1309 bp 73.80 10.08 100.61
sw_6_scaffold_8956
Species: Natronomonas pharaonis (66.67%)
3 1640 bp 75.06 27.62 100.61
sw_6_scaffold_7704
Genus: Halococcus (100%)
3 1828 bp 68.00 27.46 100.60
sw_6_scaffold_3363 7 4661 bp 54.04 8.54 100.60
sw_6_scaffold_10153 2 1503 bp 58.68 5.92 100.60
sw_6_scaffold_11932
Species: Prochlorococcus marinus (50%)
2 1342 bp 46.50 5.29 100.60
sw_6_scaffold_17614
Species: Natronomonas pharaonis (100%)
2 1014 bp 71.99 20.51 100.59
sw_6_scaffold_14265
Species: Haloquadratum walsbyi (100%)
2 1184 bp 52.11 10.22 100.59
sw_6_scaffold_8474
Domain: Bacteria (100%)
3 1709 bp 61.44 8.78 100.59
sw_6_scaffold_11440
Species: uncultured archaeon A07HR67 (50%)
2 1381 bp 72.34 27.30 100.58
sw_6_scaffold_11442
Species: Natronomonas pharaonis (66.67%)
3 1381 bp 74.44 38.81 100.58
sw_6_scaffold_20107
Phylum: Proteobacteria (66.67%)
3 1381 bp 66.26 8.83 100.58
sw_6_scaffold_13828
Species: Natronomonas pharaonis (66.67%)
3 1751 bp 77.21 18.68 100.57
sw_6_scaffold_13416
Species: Natrialba chahannaoensis (50%)
2 1235 bp 71.82 25.75 100.57
sw_6_scaffold_7043
Species: RLO_Betaproteobacteria_68_20 (50%)
2 1942 bp 69.00 10.76 100.57
sw_6_scaffold_6234
Species: Natronomonas pharaonis (66.67%)
3 2121 bp 73.55 29.61 100.57
sw_6_scaffold_16535
Class: Halobacteria (66.67%)
3 1062 bp 69.21 20.34 100.57
sw_6_scaffold_9247
Order: Natrialbales (66.67%)
3 1605 bp 74.02 12.59 100.56
sw_6_scaffold_15682
Species: Natronomonas moolapensis (50%)
4 1793 bp 73.79 34.13 100.56
sw_6_scaffold_6708
Species: Methanosarcina sp. MTP4 (50%)
2 2011 bp 69.67 8.70 100.55
sw_6_scaffold_15700
Species: Natronomonas moolapensis (66.67%)
3 1104 bp 72.55 21.92 100.54
sw_6_scaffold_15641
Species: Desulfobacter postgatei (66.67%)
3 1107 bp 59.35 30.62 100.54
sw_6_scaffold_4308
Species: Halococcus salifodinae (66.67%)
3 2775 bp 71.28 17.08 100.54
sw_6_scaffold_10269
Species: Haloquadratum walsbyi (100%)
2 1492 bp 59.92 7.44 100.54
sw_6_scaffold_18401
Species: Halococcus saccharolyticus (75%)
4 1868 bp 70.24 17.34 100.54
sw_6_scaffold_15380
Species: RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated (50%)
2 1122 bp 46.88 4.46 100.54
sw_6_scaffold_10138
Species: Rhodopirellula maiorica (50%)
2 1504 bp 52.33 5.52 100.53
sw_6_scaffold_14984
Species: Natronomonas moolapensis (50%)
2 1143 bp 70.69 23.27 100.52
sw_6_scaffold_13816
Species: halophilic archaeon J07HX64 (66.67%)
3 2113 bp 65.59 16.90 100.52
sw_6_scaffold_17995
Species: RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated (50%)
4 2170 bp 43.92 4.65 100.51
sw_6_scaffold_14200
Species: Natrinema pallidum (50%)
2 1188 bp 70.45 13.64 100.51
sw_6_scaffold_9239
Species: Halosimplex carlsbadense (100%)
2 1606 bp 65.63 12.83 100.50
sw_6_scaffold_13813 3 1212 bp 54.37 7.34 100.50
sw_6_scaffold_5840
Class: Gammaproteobacteria (50%)
4 2224 bp 72.53 8.99 100.50
sw_6_scaffold_17668
Species: Natronorubrum bangense (50%)
2 1012 bp 66.11 23.32 100.49
sw_6_scaffold_5649
Species: Candidatus Halobonum tyrrellensis (71.43%)
7 4090 bp 65.79 16.01 100.49
sw_6_scaffold_17361
Species: Natronorubrum bangense (50%)
2 1024 bp 52.05 5.66 100.49
sw_6_scaffold_6468
Genus: Haloferax (66.67%)
3 2063 bp 67.62 38.88 100.49
sw_6_scaffold_6470
Genus: Haloferax (66.67%)
3 2063 bp 67.72 71.93 100.49
sw_6_scaffold_17172
Species: Halococcus saccharolyticus (50%)
2 1033 bp 63.50 8.23 100.48
sw_6_scaffold_12992
Order: Haloferacales (66.67%)
3 1263 bp 68.57 19.71 100.48
sw_6_scaffold_12892
Species: Flammeovirgaceae bacterium 311 (50%)
2 1269 bp 43.81 4.33 100.47
sw_6_scaffold_8435
Species: Natrialba magadii (100%)
2 1714 bp 56.42 15.69 100.47
sw_6_scaffold_16335
Species: Halobacterium sp. DL1 (100%)
2 1072 bp 66.88 12.13 100.47
sw_6_scaffold_12453
Species: Natronomonas moolapensis (50%)
2 1302 bp 73.58 18.43 100.46
sw_6_scaffold_8116
Species: Natronomonas moolapensis (66.67%)
3 2846 bp 69.22 32.78 100.46
Displaying items 251-300 of 15674 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.