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SW_6_UNK

In projects: SW_6  |  diaphorachaeota

Metagenomic Context

METAGENOME

Properties

Avg. coverage: 22.55 Longest contig: 253.36 Kbp Bin length: 44.06 Mbp GC content: 60.59 %
Contigs count: 15674 Features count: 56776 rRNAs count: 17 tRNAs count: 494

Genome completeness

megabin RP 51 / 55 MC: 43 BSCG 50 / 51 MC: 38 ASCG 38 / 38 MC: 38
Displaying items 301-350 of 15674 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
sw_6_scaffold_12218
Domain: Bacteria (66.67%)
3 1320 bp 74.55 11.89 100.46
sw_6_scaffold_9777
Phylum: Bacteroidetes (66.67%)
3 1544 bp 39.31 6.28 100.45
sw_6_scaffold_17296 3 1562 bp 60.63 6.91 100.45
sw_6_scaffold_11832
Species: Natronolimnobius innermongolicus (50%)
2 1350 bp 55.19 11.04 100.44
sw_6_scaffold_15071
Species: Halogranum salarium (50%)
2 1138 bp 70.91 13.97 100.44
sw_6_scaffold_11484
Species: Haloferax larsenii (50%)
2 1377 bp 59.69 7.55 100.44
sw_6_scaffold_11383
Species: Halomicrobium mukohataei (50%)
2 1386 bp 68.54 12.27 100.43
sw_6_scaffold_11320
Species: Halococcus salifodinae (100%)
2 1392 bp 68.46 19.32 100.43
sw_6_scaffold_11210
Order: Halobacteriales (66.67%)
3 1401 bp 67.59 30.91 100.43
sw_6_scaffold_7438
Species: Natrinema sp. J7-2 (50%)
2 1873 bp 60.92 15.86 100.43
sw_6_scaffold_8851
Species: RBG_13_Acidobacteria_68_16_curated (50%)
2 1655 bp 62.60 7.43 100.42
sw_6_scaffold_10979
Species: Halovivax ruber (66.67%)
3 1422 bp 67.79 11.11 100.42
sw_6_scaffold_14191
Species: Halobiforma lacisalsi (50%)
2 1189 bp 69.47 11.94 100.42
sw_6_scaffold_14145
Phylum: Euryarchaeota (66.67%)
3 1192 bp 68.96 7.80 100.42
sw_6_scaffold_8740 3 1673 bp 48.95 9.44 100.42
sw_6_scaffold_13164
Species: Natrialba taiwanensis (50%)
2 1252 bp 65.42 11.34 100.40
sw_6_scaffold_7719
Species: Rhodothermus marinus (50%)
2 2262 bp 64.41 64.76 100.40
sw_6_scaffold_17789
Species: Natronomonas moolapensis (50%)
2 1007 bp 72.39 17.08 100.40
sw_6_scaffold_3800
Genus: Natronomonas (50%)
4 3042 bp 70.41 36.00 100.39
sw_6_scaffold_17405 2 1022 bp 44.62 7.24 100.39
sw_6_scaffold_21360
Order: Natrialbales (66.67%)
3 1279 bp 59.42 47.15 100.39
sw_6_scaffold_17146
Species: Natronomonas moolapensis (66.67%)
3 1034 bp 69.15 22.73 100.39
sw_6_scaffold_17085
Species: uncultured organism (50%)
2 1037 bp 65.86 7.14 100.39
sw_6_scaffold_26321
Class: Halobacteria (66.67%)
3 1297 bp 69.55 25.29 100.39
sw_6_scaffold_9670
Species: Haloarcula vallismortis (100%)
3 1557 bp 48.75 4.75 100.38
sw_6_scaffold_31379
Class: Halobacteria (66.67%)
3 1300 bp 66.92 36.92 100.38
sw_6_scaffold_16963
Species: Hymenobacter sp. DG25B (50%)
2 1043 bp 40.08 5.27 100.38
sw_6_scaffold_16888
Species: Halonotius sp. J07HN6 (100%)
2 1046 bp 69.12 21.03 100.38
sw_6_scaffold_7644
Species: Natronomonas pharaonis (100%)
2 1838 bp 53.16 5.60 100.38
sw_6_scaffold_16735
Species: Inquilinus limosus (50%)
2 1052 bp 75.48 8.46 100.38
sw_6_scaffold_16736
Species: Fulvimarina pelagi (50%)
2 1052 bp 66.83 7.98 100.38
sw_6_scaffold_19103
Species: Gemmatimonadetes bacterium KBS708 (50%)
2 1578 bp 53.93 5.96 100.38
sw_6_scaffold_12244
Species: Halalkalicoccus jeotgali (100%)
2 1318 bp 67.22 10.32 100.38
sw_6_scaffold_28491
Species: Haloarcula amylolytica (66.67%)
3 1324 bp 65.03 16.84 100.38
sw_6_scaffold_20368
Species: Natronomonas moolapensis (66.67%)
3 1330 bp 72.26 31.88 100.38
sw_6_scaffold_16428 2 1067 bp 50.14 8.15 100.37
sw_6_scaffold_27888
Species: Halosimplex carlsbadense (100%)
3 1602 bp 69.73 16.29 100.37
sw_6_scaffold_16375
Species: Halobiforma lacisalsi (50%)
2 1070 bp 60.09 6.92 100.37
sw_6_scaffold_16213
Species: BJP_IG2158_Thermoplasmatales_53_16 (50%)
2 1079 bp 71.36 8.16 100.37
sw_6_scaffold_16216
Species: Haloquadratum sp. J07HQX50 (100%)
2 1079 bp 61.45 10.38 100.37
sw_6_scaffold_11206
Domain: Bacteria (100%)
3 2188 bp 60.74 9.78 100.37
sw_6_scaffold_7069 3 1937 bp 63.09 7.49 100.36
sw_6_scaffold_11414
Order: Halobacteriales (100%)
3 1384 bp 69.58 15.25 100.36
sw_6_scaffold_15438
Species: Halomicrobium mukohataei (50%)
2 1118 bp 66.73 14.31 100.36
sw_6_scaffold_11227
Species: Halobacterium sp. DL1 (100%)
2 1399 bp 70.76 10.08 100.36
sw_6_scaffold_15234
Species: Caldicellulosiruptor lactoaceticus (50%)
2 1130 bp 50.00 10.62 100.35
sw_6_scaffold_14855
Species: Natronomonas moolapensis (50%)
2 1151 bp 66.64 46.31 100.35
sw_6_scaffold_10666
Species: uncultured archaeon A07HB70 (50%)
2 1450 bp 72.97 8.34 100.35
sw_6_scaffold_14665
Species: Thioalkalivibrio sulfidiphilus (50%)
2 1163 bp 68.10 7.39 100.34
sw_6_scaffold_14544
Species: Natronomonas pharaonis (50%)
2 1169 bp 74.34 42.94 100.34
Displaying items 301-350 of 15674 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.