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sw_7_scaffold_216

Search features with annotation key words

Displaying items 1-30 of 33 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_7_scaffold_216_1
unknown

Not on your lists

343..555
DNA (213bp) protein (71aa)

This feature has no annotations

sw_7_scaffold_216_2
unknown

Not on your lists

552..1010
DNA (459bp) protein (153aa)

This feature has no annotations

sw_7_scaffold_216_3
unknown

Not on your lists

comp(906..1352)
DNA (447bp) protein (149aa)

This feature has no annotations

sw_7_scaffold_216_trna_1
unknown

Not on your lists

1383..1457
DNA (75bp)
transferRNA
sw_7_scaffold_216_4
unknown

Not on your lists

comp(1694..1882)
DNA (189bp) protein (63aa)

This feature has no annotations

sw_7_scaffold_216_5
Halorubrum sp. AJ67, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(2692..2991)
DNA (300bp) protein (100aa)
Uncharacterized protein n=1 Tax=Halorubrum sp. AJ67 RepID=V6DP13_9EURY
Uncharacterized protein {ECO:0000313|EMBL:CDK37979.1}; TaxID=1173487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum sp. AJ67.;"
hypothetical protein
sw_7_scaffold_216_6
Halovivax ruber, Halovivax, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

3171..3941
DNA (771bp) protein (257aa)
DNA polymerase elongation subunit (Family B) n=1 Tax=Halovivax ruber (strain DSM 18193 / JCM 13892 / XH-70) RepID=L0ICW7_HALRX
DNA polymerase elongation subunit (family B)
DNA polymerase elongation subunit (Family B) {ECO:0000313|EMBL:AGB17390.1}; TaxID=797302 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halovivax.;" source="Halovivax rube
sw_7_scaffold_216_7
Salinispora tropica, Salinispora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4295..5146)
DNA (852bp) protein (284aa)
Uncharacterized protein n=1 Tax=Salinispora tropica (strain ATCC BAA-916 / DSM 44818 / CNB-440) RepID=A4X4V1_SALTO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABP53901.1}; TaxID=369723 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Salinispora.;" source="Salinispora tropica (strain ATCC BA
sw_7_scaffold_216_8
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(5630..7510)
DNA (1881bp) protein (627aa)
Chromosome segregation protein (Spc25, Csm1, Pcs1) n=1 Tax=Halococcus morrhuae DSM 1307 RepID=M0M4L4_HALMO
Chromosome segregation protein {ECO:0000313|EMBL:EMA51234.1}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus thailande
chromosome segregation protein SMC
sw_7_scaffold_216_9
Natronorubrum tibetense, Natronorubrum, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

7989..9563
DNA (1575bp) protein (525aa)
AMP-dependent synthetase and ligase n=1 Tax=Natronorubrum tibetense GA33 RepID=L9W7P5_9EURY
AMP-dependent synthetase and ligase {ECO:0000313|EMBL:ELY45500.1}; TaxID=1114856 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronorubrum.;" source="Natronorubrum tibe
acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II
sw_7_scaffold_216_10
Thermus oshimai, Thermus, Thermales, Deinococci, Deinococcus-Thermus, Bacteria

Not on your lists

9730..10950
DNA (1221bp) protein (407aa)
ABC-type branched-chain amino acid transport system, periplasmic component n=1 Tax=Thermus oshimai JL-2 RepID=K7QWZ1_THEOS
branched chain amino acid ABC transporter substrate-binding protein
ABC-type branched-chain amino acid transport system, periplasmic component {ECO:0000313|EMBL:AFV77436.1}; Flags: Precursor;; TaxID=751945 species="Bacteria; Deinococcus-Thermus; Deinococci; Thermales;
sw_7_scaffold_216_11
Natronorubrum sulfidifaciens, Natronorubrum, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

10962..11858
DNA (897bp) protein (299aa)
Inner-membrane translocator n=1 Tax=Natronorubrum sulfidifaciens JCM 14089 RepID=L9W4S7_9EURY
Inner-membrane translocator {ECO:0000313|EMBL:ELY44455.1}; TaxID=1230460 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronorubrum.;" source="Natronorubrum sulfidifacie
inner-membrane translocator
sw_7_scaffold_216_12
RBG_19FT_COMBO_Deltaproteobacteria_46_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11851..12900
DNA (1050bp) protein (350aa)
braE; high-affinity branched-chain amino acid transport system permease BraE Tax=RBG_19FT_COMBO_Deltaproteobacteria_46_12_curated
Inner-membrane translocator id=4526628 bin=GWC2_Pelobacter_58_13 species=unknown genus=Pusillimonas taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWC2_Pelobacter_58_13 organism_group=Deltaproteobacteria organism_desc=Good +
inner-membrane translocator
sw_7_scaffold_216_13
Halovivax asiaticus, Halovivax, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

12893..13648
DNA (756bp) protein (252aa)
ABC transporter n=1 Tax=Halovivax asiaticus JCM 14624 RepID=M0BF33_9EURY
ABC transporter {ECO:0000313|EMBL:ELZ08913.1}; TaxID=1227490 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halovivax.;" source="Halovivax asiaticus JCM 14624.;"
ABC-type branched-chain amino acid transport systems, ATPase component
sw_7_scaffold_216_14
Halorubrum lacusprofundi, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

13645..14358
DNA (714bp) protein (238aa)
ABC transporter related n=1 Tax=Halorubrum lacusprofundi (strain ATCC 49239 / DSM 5036 / JCM 8891 / ACAM 34) RepID=B9LRK7_HALLT
ABC transporter
ABC transporter related {ECO:0000313|EMBL:ACM55830.1}; TaxID=416348 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum lacusprofundi (strain
sw_7_scaffold_216_15
Natrinema pellirubrum, Natrinema, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

14570..15109
DNA (540bp) protein (180aa)
Uncharacterized protein n=1 Tax=Natrinema pellirubrum (strain DSM 15624 / JCM 10476 / NCIMB 786) RepID=L0JR55_NATP1
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGB32841.1}; TaxID=797303 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrinema.;" source="Natrinema pellirubrum (strain DSM 1
sw_7_scaffold_216_16
Haloarcula japonica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

15106..16317
DNA (1212bp) protein (404aa)
Alcohol dehydrogenase, class IV n=1 Tax=Haloarcula japonica DSM 6131 RepID=M0L0E1_HALJP
Alcohol dehydrogenase, class IV {ECO:0000313|EMBL:EMA26996.1}; TaxID=1227453 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula japonica
iron-containing alcohol dehydrogenase
sw_7_scaffold_216_17
Candidatus Halobonum tyrrellensis, Candidatus Halobonum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(16366..18300)
DNA (1935bp) protein (645aa)
AMP-dependent synthetase and ligase; K01895 acetyl-CoA synthetase [EC:6.2.1.1] id=24614816 bin=Halobonum_tyrrellensis species=Candidatus Halobonum tyrrellensis genus=Candidatus Halobonum taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=Halobonum_tyrrellensis
AMP-dependent synthetase and ligase {ECO:0000313|EMBL:ESP88716.1}; TaxID=1324957 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Candidatus Halobonum.;" source="Candi
AMP-dependent synthetase and ligase
sw_7_scaffold_216_18
Haloarcula marismortui, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

18489..19031
DNA (543bp) protein (181aa)
Uncharacterized protein n=1 Tax=Haloarcula marismortui (strain ATCC 43049 / DSM 3752 / JCM 8966 / VKM B-1809) RepID=Q5UY38_HALMA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAV47815.1}; TaxID=272569 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula marismortui (stra
sw_7_scaffold_216_19
Haloterrigena turkmenica, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

19174..19938
DNA (765bp) protein (255aa)
Transcriptional regulator, IclR family n=1 Tax=Haloterrigena turkmenica (strain ATCC 51198 / DSM 5511 / NCIMB 13204 / VKM B-1734) RepID=D2RXL7_HALTV
IclR family transcriptional regulator
Transcriptional regulator, IclR family {ECO:0000313|EMBL:ADB61741.1}; TaxID=543526 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Haloterrigena.;" source="Haloterrigena tu
sw_7_scaffold_216_20
Methanocaldococcus infernus, Methanocaldococcus, Methanococcales, Methanococci, Euryarchaeota, Archaea

Not on your lists

20285..21226
DNA (942bp) protein (314aa)
dihydrodipicolinate synthase (EC:4.2.1.52)
4-hydroxy-tetrahydrodipicolinate synthase {ECO:0000256|HAMAP-Rule:MF_00418}; Short=HTPA synthase {ECO:0000256|HAMAP-Rule:MF_00418};; EC=4.3.3.7 {ECO:0000256|HAMAP-Rule:MF_00418};; TaxID=573063 species
4-hydroxy-tetrahydrodipicolinate synthase n=1 Tax=Methanocaldococcus infernus (strain DSM 11812 / JCM 15783 / ME) RepID=D5VSK6_METIM
sw_7_scaffold_216_21
Halogeometricum pallidum, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

21307..21927
DNA (621bp) protein (207aa)
Uncharacterized protein n=1 Tax=Halosarcina pallida JCM 14848 RepID=M0D8G6_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ31771.1}; TaxID=1227487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" source="Halogeometricum pallidum J
hypothetical protein
sw_7_scaffold_216_22
Halorubrum litoreum, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

23660..23839
DNA (180bp) protein (60aa)
Uncharacterized protein n=1 Tax=Halorubrum litoreum JCM 13561 RepID=M0P177_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA63593.1}; TaxID=1227483 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum litoreum JCM 13561.;
hypothetical protein
sw_7_scaffold_216_23
Halorhabdus tiamatea, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

23867..24586
DNA (720bp) protein (240aa)
Uncharacterized protein n=1 Tax=Halorhabdus tiamatea SARL4B RepID=S6CTX9_9EURY
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCQ33979.1}; TaxID=1033806 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halorhabdus.;" source="Halorhabdus tiamatea SARL4
sw_7_scaffold_216_24
Halobacterium sp. DL1, Halobacterium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

24915..25376
DNA (462bp) protein (154aa)
Putative uncharacterized protein n=1 Tax=Halobacterium sp. DL1 RepID=G4IAH0_9EURY
Uncharacterized protein {ECO:0000313|EMBL:AHG02752.1}; TaxID=751944 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halobacterium.;" source="Halobacterium sp. DL1.;"
hypothetical protein
sw_7_scaffold_216_25
unknown

Not on your lists

comp(26068..26844)
DNA (777bp) protein (259aa)

This feature has no annotations

sw_7_scaffold_216_26
Halorubrum sp. AJ67, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

26853..27062
DNA (210bp) protein (70aa)
Uncharacterized protein n=1 Tax=Halorubrum sp. AJ67 RepID=V6DZ60_9EURY
Uncharacterized protein {ECO:0000313|EMBL:CDK40670.1}; TaxID=1173487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum sp. AJ67.;"
sw_7_scaffold_216_27
unknown

Not on your lists

comp(27152..27697)
DNA (546bp) protein (182aa)

This feature has no annotations

sw_7_scaffold_216_28
unknown

Not on your lists

28005..28604
DNA (600bp) protein (200aa)

This feature has no annotations

sw_7_scaffold_216_29
Haloterrigena salina, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(28988..29494)
DNA (507bp) protein (169aa)
Uncharacterized protein n=1 Tax=Haloterrigena salina JCM 13891 RepID=M0BSR6_9EURY
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ELZ13152.1}; TaxID=1227488 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Haloterrigena.;" source="Haloterrigena salina JCM 13891
Displaying items 1-30 of 33 in total

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