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SW_7_UNK

In projects: SW_7  |  diaphorachaeota

Metagenomic Context

METAGENOME

Properties

Avg. coverage: 24.23 Longest contig: 413.20 Kbp Bin length: 52.67 Mbp GC content: 60.00 %
Contigs count: 18366 Features count: 69333 rRNAs count: 17 tRNAs count: 772

Genome completeness

megabin RP 50 / 55 MC: 47 BSCG 50 / 51 MC: 41 ASCG 38 / 38 MC: 37
Displaying items 201-250 of 18366 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
sw_7_scaffold_18052
Species: Halostagnicola larsenii (100%)
2 1141 bp 70.99 56.27 100.96
sw_7_scaffold_12665
Species: Halorubrum lacusprofundi (50%)
4 3218 bp 57.58 15.54 100.96
sw_7_scaffold_17802
Order: Halobacteriales (66.67%)
3 1153 bp 68.26 21.16 100.95
sw_7_scaffold_17753
Species: Natrialba taiwanensis (50%)
2 1156 bp 60.21 7.70 100.95
sw_7_scaffold_2895
Species: Listeria rocourtiae (50%)
2 5899 bp 66.71 23.31 100.95
sw_7_scaffold_9662
Species: Candidatus Nanosalina sp. J07AB43 (50%)
2 1905 bp 45.04 5.56 100.95
sw_7_scaffold_15400
Species: Natronomonas pharaonis (50%)
2 1905 bp 67.82 85.56 100.95
sw_7_scaffold_17143
Species: Methanocella arvoryzae (50%)
2 1189 bp 66.44 12.78 100.93
sw_7_scaffold_17145
Genus: Halococcus (50%)
4 1189 bp 59.38 11.52 100.93
sw_7_scaffold_16940
Species: Natrinema gari (50%)
2 1201 bp 67.44 21.02 100.92
sw_7_scaffold_12179
Genus: Natronomonas (66.67%)
3 2307 bp 72.39 85.57 100.91
sw_7_scaffold_22205
Order: Haloferacales (100%)
3 1546 bp 71.22 13.84 100.91
sw_7_scaffold_16666
Order: Haloferacales (66.67%)
3 1216 bp 68.67 20.64 100.91
sw_7_scaffold_14565
Species: Microscilla marina (50%)
2 2212 bp 56.24 8.63 100.90
sw_7_scaffold_21015
Order: Halobacteriales (100%)
3 1005 bp 72.34 10.75 100.90
sw_7_scaffold_18527
Species: Halogranum salarium (50%)
2 1118 bp 69.50 15.21 100.89
sw_7_scaffold_16362
Species: Halogeometricum pallidum (50%)
2 1234 bp 72.04 22.20 100.89
sw_7_scaffold_13004
Species: Natronomonas pharaonis (66.67%)
3 1493 bp 67.58 22.57 100.87
sw_7_scaffold_15781
Species: Natronomonas moolapensis (50%)
2 1270 bp 73.62 46.30 100.87
sw_7_scaffold_26490 4 1389 bp 52.41 5.76 100.86
sw_7_scaffold_17686
Species: Haloferax sp. Arc-Hr (50%)
2 1160 bp 62.93 8.36 100.86
sw_7_scaffold_8887
Species: Halorubrum coriense (50%)
4 3132 bp 69.60 14.53 100.86
sw_7_scaffold_8515 5 2109 bp 65.39 9.63 100.85
sw_7_scaffold_6913
Species: Haloferax larsenii (50%)
2 2463 bp 69.18 8.40 100.85
sw_7_scaffold_16763 7 2347 bp 45.29 7.58 100.85
sw_7_scaffold_23820
Genus: Natronomonas (66.67%)
3 1410 bp 65.60 67.45 100.85
sw_7_scaffold_14822
Species: Natronomonas pharaonis (50%)
2 2014 bp 72.64 97.52 100.84
sw_7_scaffold_23791
Species: Microcoleus sp. PCC 7113 (66.67%)
3 1422 bp 67.86 9.92 100.84
sw_7_scaffold_17707
Class: Actinobacteria (100%)
3 1928 bp 76.09 20.28 100.83
sw_7_scaffold_19005
Class: Halobacteria (66.67%)
3 1095 bp 73.88 81.28 100.82
sw_7_scaffold_35484
Species: Natronomonas pharaonis (50%)
2 1107 bp 68.65 60.79 100.81
sw_7_scaffold_14571
Species: Halococcus salifodinae (100%)
2 1357 bp 69.71 25.28 100.81
sw_7_scaffold_11785
Species: Haloarcula vallismortis (50%)
2 2607 bp 62.33 36.90 100.81
sw_7_scaffold_15360
Genus: Halococcus (80%)
5 1866 bp 68.01 47.64 100.80
sw_7_scaffold_11776
Species: Halococcus salifodinae (50%)
4 1622 bp 69.67 43.65 100.80
sw_7_scaffold_41353 2 1003 bp 52.64 5.78 100.80
sw_7_scaffold_7588
Species: Halomicrobium mukohataei (50%)
2 2807 bp 67.22 13.43 100.78
sw_7_scaffold_28610
Species: Salinibacter ruber (100%)
2 1298 bp 63.33 7.94 100.77
sw_7_scaffold_20121
Species: Haloarcula japonica (50%)
2 1042 bp 53.36 5.37 100.77
sw_7_scaffold_10941 4 4189 bp 67.01 9.52 100.76
sw_7_scaffold_15195 4 1310 bp 65.11 9.16 100.76
sw_7_scaffold_7344
Order: Natrialbales (50%)
4 2358 bp 66.37 19.04 100.76
sw_7_scaffold_19460
Species: Haloterrigena limicola (66.67%)
3 1072 bp 70.90 47.57 100.75
sw_7_scaffold_19141
Species: Halococcus salifodinae (100%)
2 1087 bp 69.09 28.15 100.74
sw_7_scaffold_34987
Species: Halobiforma lacisalsi (50%)
2 1233 bp 63.99 7.30 100.73
sw_7_scaffold_17645 4 1927 bp 43.75 5.55 100.73
sw_7_scaffold_10373
Species: halophilic archaeon J07HX64 (50%)
2 1796 bp 59.41 10.52 100.72
sw_7_scaffold_7366 4 2350 bp 45.53 7.45 100.72
sw_7_scaffold_25271
Species: uncultured archaeon A07HB70 (100%)
3 1254 bp 63.24 13.96 100.72
sw_7_scaffold_8516 3 2109 bp 47.84 17.35 100.71
Displaying items 201-250 of 18366 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.