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SW_8_UNK

In projects: SW_8

Metagenomic Context

METAGENOME

Properties

Avg. coverage: 17.32 Longest contig: 151.13 Kbp Bin length: 41.32 Mbp GC content: 58.51 %
Contigs count: 16401 Features count: 53796 rRNAs count: 12 tRNAs count: 452

Genome completeness

megabin RP 51 / 55 MC: 46 BSCG 48 / 51 MC: 40 ASCG 38 / 38 MC: 38
Displaying items 851-900 of 16401 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
sw_8_scaffold_1843 8 4775 bp 41.51 16.88 50.39
sw_8_scaffold_5227 8 4516 bp 41.23 7.20 84.43
sw_8_scaffold_8453
Species: Salinibacter ruber (50%)
8 6514 bp 64.42 13.52 77.02
sw_8_scaffold_2006
Genus: Natronomonas (50%)
8 5549 bp 51.54 15.28 63.25
sw_8_scaffold_4096 8 2705 bp 65.29 6.88 90.50
sw_8_scaffold_3398 8 5582 bp 56.23 8.40 75.24
sw_8_scaffold_1030
Species: halophilic archaeon J07HX64 (50%)
8 16483 bp 70.77 28.56 84.98
sw_8_scaffold_2272 8 5678 bp 56.20 8.72 89.87
sw_8_scaffold_2561 8 9154 bp 54.66 8.36 60.56
sw_8_scaffold_1926 8 6296 bp 65.93 15.45 69.38
sw_8_scaffold_1745
Species: Salinibacter ruber (100%)
8 7750 bp 61.48 43.91 85.39
sw_8_scaffold_1146 8 10990 bp 54.75 8.32 84.78
sw_8_scaffold_5238 8 5881 bp 55.26 9.87 80.96
sw_8_scaffold_1607
Class: Halobacteria (50%)
8 4848 bp 46.49 7.47 76.73
sw_8_scaffold_1446 8 5163 bp 53.05 8.46 76.23
sw_8_scaffold_1193 8 8729 bp 55.81 8.80 79.01
sw_8_scaffold_1078
Species: Moorea producens (62.5%)
8 6100 bp 50.38 8.21 94.62
sw_8_scaffold_940 8 6621 bp 46.96 13.29 89.62
sw_8_scaffold_1401 8 6870 bp 56.14 8.63 96.51
sw_8_scaffold_2789 8 5560 bp 39.01 7.03 75.81
sw_8_scaffold_618 8 8431 bp 54.74 8.23 64.26
sw_8_scaffold_1102 8 8118 bp 55.73 8.47 82.56
sw_8_scaffold_1033
Phylum: Cyanobacteria (75%)
8 6274 bp 40.42 12.51 71.58
sw_8_scaffold_3926 8 6025 bp 53.16 8.25 72.90
sw_8_scaffold_6414 8 6844 bp 62.46 8.88 71.80
sw_8_scaffold_7336 8 4378 bp 49.98 9.02 71.20
sw_8_scaffold_895 8 8310 bp 53.61 9.13 74.44
sw_8_scaffold_1379
Species: Rhodothermus marinus (50%)
8 7796 bp 65.67 11.49 78.89
sw_8_scaffold_1425
Class: Halobacteria (62.5%)
8 6733 bp 51.23 11.02 72.72
sw_8_scaffold_2282
Phylum: Euryarchaeota (50%)
8 7260 bp 38.29 6.12 78.72
sw_8_scaffold_2898 8 7348 bp 52.20 9.57 60.10
sw_8_scaffold_1264
Order: Bacteroidetes Order II. Incertae sedis (50%)
8 7112 bp 64.83 10.76 87.09
sw_8_scaffold_5958
Class: Halobacteria (50%)
8 3297 bp 58.36 4.73 81.44
sw_8_scaffold_5036 8 4428 bp 51.49 6.98 88.14
sw_8_scaffold_2682 8 6156 bp 57.31 8.43 74.61
sw_8_scaffold_619
Class: Oscillatoriophycideae (50%)
8 8420 bp 50.87 19.71 86.62
sw_8_scaffold_1057
Domain: Bacteria (75%)
8 6558 bp 65.84 52.93 89.98
sw_8_scaffold_481
Class: Oscillatoriophycideae (62.5%)
8 9955 bp 49.95 10.37 90.26
sw_8_scaffold_2111
Order: Bacteroidetes Order II. Incertae sedis (50%)
8 9249 bp 56.38 12.33 69.83
sw_8_scaffold_4355 8 4727 bp 46.69 9.67 51.60
sw_8_scaffold_4142 8 5296 bp 52.57 7.99 74.15
sw_8_scaffold_3278
Class: Halobacteria (75%)
8 6018 bp 50.98 6.43 77.62
sw_8_scaffold_4144
Order: Oscillatoriales (50%)
8 6137 bp 43.85 14.42 79.34
sw_8_scaffold_1588 8 8039 bp 56.15 11.93 89.15
sw_8_scaffold_1611 8 10030 bp 52.37 9.28 66.55
sw_8_scaffold_2688
Genus: Halococcus (50%)
8 7578 bp 65.57 13.85 79.37
sw_8_scaffold_1859 8 4385 bp 53.82 10.06 70.88
sw_8_scaffold_1943 8 8539 bp 51.88 8.76 63.56
sw_8_scaffold_1289
Order: Natrialbales (50%)
8 5533 bp 63.42 31.32 94.61
sw_8_scaffold_7128 8 2884 bp 37.10 7.11 82.04
Displaying items 851-900 of 16401 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.